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L2_040_365G1_scaffold_955

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_955_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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349..684
DNA (336bp) protein (112aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
mRNA interferase n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKC4_9FIRM
Growth inhibitor
L2_040_365G1_scaffold_955_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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904..1170
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75910.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_955_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1309..2946
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75909.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
recombinase
L2_040_365G1_scaffold_955_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2946..4676
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76727.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
site-specific recombinase
L2_040_365G1_scaffold_955_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4655..6262
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CF84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76726.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
recombinase
L2_040_365G1_scaffold_955_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6267..7169
DNA (903bp) protein (301aa)
enolase (EC:4.2.1.11)
Phosphopyruvate hydratase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5M0E0_9FIRM
Phosphopyruvate hydratase {ECO:0000313|EMBL:EQM98780.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_955_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7257..7493
DNA (237bp) protein (79aa)
Preprotein translocase, SecG subunit n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGM4_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EES75904.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
protein translocase, SecG subunit
L2_040_365G1_scaffold_955_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7598..9880
DNA (2283bp) protein (761aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=2 Tax=Ruminococcus RepID=C6JGM3_9FIRM
L2_040_365G1_scaffold_955_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9904..10374
DNA (471bp) protein (157aa)
SsrA-binding protein n=2 Tax=Ruminococcus RepID=C6JGM2_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
SsrA-binding protein
L2_040_365G1_scaffold_955_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10528..11118
DNA (591bp) protein (197aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75901.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_955_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11497..12612
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75900.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_040_365G1_scaffold_955_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12693..13388
DNA (696bp) protein (232aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=2 Tax=Ruminococcus RepID=C6JGL9_9FIRM
L2_040_365G1_scaffold_955_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13458..14009
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGL8_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ribosome recycling factor
L2_040_365G1_scaffold_955_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14145..14852
DNA (708bp) protein (236aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=2 Tax=Ruminococcus RepID=C6JGL7_9FIRM
L2_040_365G1_scaffold_955_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14856..15650
DNA (795bp) protein (265aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=2 Tax=Ruminococcus RepID=C6JGL6_9FIRM
L2_040_365G1_scaffold_955_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15854..16996
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGL5_9FIRM
L2_040_365G1_scaffold_955_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16998..18293
DNA (1296bp) protein (432aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RIP metalloprotease RseP n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGL4_9FIRM
membrane-associated zinc metalloprotease
L2_040_365G1_scaffold_955_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18661..20130
DNA (1470bp) protein (490aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CES2_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDD76704.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
diguanylate cyclase (GGDEF) domain
L2_040_365G1_scaffold_955_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20155..20886
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76703.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
integral membrane protein
L2_040_365G1_scaffold_955_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21135..21827
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CF53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76701.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_040_365G1_scaffold_955_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22165..23871
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CER5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76699.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_040_365G1_scaffold_955_22
unknown

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24520..24726
DNA (207bp) protein (69aa)

This feature has no annotations

L2_040_365G1_scaffold_955_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25064..26332)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75889.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Putative peptidoglycan-binding domain-containing protein
L2_040_365G1_scaffold_955_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26752..27759
DNA (1008bp) protein (336aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGK8_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_955_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27783..29579
DNA (1797bp) protein (599aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHA1_9FIRM
L2_040_365G1_scaffold_955_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29619..30746
DNA (1128bp) protein (376aa)
RNA polymerase sigma factor SigA n=2 Tax=Ruminococcus RepID=C6JGK6_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNA polymerase, sigma 70 subunit, RpoD
L2_040_365G1_scaffold_955_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30757..31464
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75885.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted SAM-dependent methyltransferase
L2_040_365G1_scaffold_955_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31451..32233
DNA (783bp) protein (261aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Ruminococcus RepID=C6JGK4_9FIRM
conserved hypothetical protein TIGR00486
L2_040_365G1_scaffold_955_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32352..34019
DNA (1668bp) protein (556aa)
Uridine kinase (EC:2.7.1.48)
Phosphoribulokinase/uridine kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CF27_9FIRM
Phosphoribulokinase/uridine kinase {ECO:0000313|EMBL:CDD76681.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_040_365G1_scaffold_955_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34673..35110)
DNA (438bp) protein (146aa)
Aspartate carbamoyltransferase, regulatory subunit n=2 Tax=Ruminococcus RepID=C6JGK2_9FIRM
Aspartate carbamoyltransferase, regulatory subunit {ECO:0000313|EMBL:EES75882.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Aspartate carbamoyltransferase, regulatory subunit
Displaying items 1-30 of 43 in total

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