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L2_040_365G1_scaffold_1030

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_1030_1
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..152)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ANV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ26144.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L2_040_365G1_scaffold_1030_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

367..1215
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76996.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
helix-turn-helix domain protein
L2_040_365G1_scaffold_1030_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1335..2417)
DNA (1083bp) protein (361aa)
ATP:cob(I)alamin adenosyltransferase n=2 Tax=Ruminococcus RepID=C6JCU8_9FIRM
Ethanolamine utilization protein eutT {ECO:0000313|EMBL:CDD78941.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP:cob(I)alamin adenosyltransferase
L2_040_365G1_scaffold_1030_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2486..3637)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78940.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Alcohol dehydrogenase, class IV
L2_040_365G1_scaffold_1030_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3662..4426)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78939.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulators of sugar metabolism
L2_040_365G1_scaffold_1030_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4494..5042)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCV1_9FIRM
Microcompartments protein {ECO:0000313|EMBL:CDD78938.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_040_365G1_scaffold_1030_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5059..6387)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78937.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC
L2_040_365G1_scaffold_1030_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6392..6658)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78936.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_040_365G1_scaffold_1030_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6791..7435)
DNA (645bp) protein (215aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Phosphate propanoyltransferase n=2 Tax=Ruminococcus RepID=C6JCV4_9FIRM
Propanediol utilization protein
L2_040_365G1_scaffold_1030_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7521..7997)
DNA (477bp) protein (159aa)
Propanediol utilization protein PduA n=2 Tax=Ruminococcus RepID=C6JCV5_9FIRM
Microcompartments protein {ECO:0000313|EMBL:CDD78934.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_040_365G1_scaffold_1030_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7997..8299)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77005.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_040_365G1_scaffold_1030_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8336..8611)
DNA (276bp) protein (92aa)
Propanediol utilization protein PduA n=2 Tax=Ruminococcus RepID=C6JCV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78931.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_040_365G1_scaffold_1030_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8684..8998)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78929.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_040_365G1_scaffold_1030_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9094..10317)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77008.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L2_040_365G1_scaffold_1030_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10345..11733)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77009.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
NAD-dependent aldehyde dehydrogenases
L2_040_365G1_scaffold_1030_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11763..12626)
DNA (864bp) protein (288aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases (EC:4.1.2.17)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCW1_9FIRM
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EES77010.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_1030_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12812..13603)
DNA (792bp) protein (264aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Glycyl-radical enzyme activating protein family n=2 Tax=Ruminococcus RepID=C6JCW2_9FIRM
Glycyl-radical enzyme activating protein family {ECO:0000313|EMBL:CDD80617.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_040_365G1_scaffold_1030_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13677..16202)
DNA (2526bp) protein (842aa)
glycerol dehydratase, cobalamin-independent, large subunit (EC:2.3.1.54 4.2.1.30)
Pyruvate formate-lyase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCW3_9FIRM
Pyruvate formate-lyase {ECO:0000313|EMBL:EES77012.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_1030_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16586..16969)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80614.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_040_365G1_scaffold_1030_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17435..18439)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77916.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_040_365G1_scaffold_1030_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18459..20750)
DNA (2292bp) protein (764aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77015.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cysteine protease
L2_040_365G1_scaffold_1030_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21161..21457)
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77016.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized protein containing a Zn-finger-like domain
L2_040_365G1_scaffold_1030_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22122..22637)
DNA (516bp) protein (172aa)
Ethanolamine utilization protein, EutP n=2 Tax=Ruminococcus RepID=C6JCW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77909.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Ethanolamine utilization protein
L2_040_365G1_scaffold_1030_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22726..23154)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77907.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Ethanolamine utilization protein
L2_040_365G1_scaffold_1030_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23166..23531)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77019.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Ethanolamine utilization protein
L2_040_365G1_scaffold_1030_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23937..25373)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77904.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L2_040_365G1_scaffold_1030_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25880..27352)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77903.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_040_365G1_scaffold_1030_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27704..28690)
DNA (987bp) protein (329aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=2 Tax=Ruminococcus RepID=C6JCX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77901.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_040_365G1_scaffold_1030_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28883..29530)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77899.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L2_040_365G1_scaffold_1030_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29523..30368)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77898.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying items 1-30 of 33 in total

View Taxonomy