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L2_040_365G1_scaffold_1250

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_1250_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..377)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44749.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Cysteine-rich secretory protein family./Putative cell wall binding repeat.
L2_040_365G1_scaffold_1250_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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551..748
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44747.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_040_365G1_scaffold_1250_3
unknown

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comp(771..1151)
DNA (381bp) protein (127aa)

This feature has no annotations

L2_040_365G1_scaffold_1250_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1342..3165)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44744.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Type IV secretory pathway, VirD4 component
L2_040_365G1_scaffold_1250_5
Staphylococcus massiliensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3107..3976)
DNA (870bp) protein (290aa)
Putative relaxase n=1 Tax=Staphylococcus massiliensis S46 RepID=K9AD18_9STAP
Putative relaxase {ECO:0000313|EMBL:EKU45138.1}; TaxID=1229783 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus massiliensis S46.;"
relaxase/mobilization nuclease domain-containing protein
L2_040_365G1_scaffold_1250_6
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3967..4290)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JS63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33344.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L2_040_365G1_scaffold_1250_7
unknown

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comp(4601..4792)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_040_365G1_scaffold_1250_8
unknown

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comp(4807..5079)
DNA (273bp) protein (91aa)

This feature has no annotations

L2_040_365G1_scaffold_1250_9
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5399..5617)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LTP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59102.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L2_040_365G1_scaffold_1250_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5880..7256)
DNA (1377bp) protein (459aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RPT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17066.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_040_365G1_scaffold_1250_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7573..8517)
DNA (945bp) protein (315aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RPU1_9CLOT
CMP-binding protein {ECO:0000313|EMBL:ENZ47967.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
metal dependent phosphohydrolase
L2_040_365G1_scaffold_1250_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8854..10194)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=6 Tax=Clostridium bolteae RepID=A8RPU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17070.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
PDZ/DHR/GLGF domain-containing protein
L2_040_365G1_scaffold_1250_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10384..12822
DNA (2439bp) protein (813aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Endonuclease MutS2 n=3 Tax=Clostridium bolteae RepID=A8RPU6_9CLOT
MutS2 family protein
L2_040_365G1_scaffold_1250_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12850..13560
DNA (711bp) protein (237aa)
Uncharacterized protein n=17 Tax=Clostridium RepID=A8RPU7_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:ENZ37124.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
winged helix family two component transcriptional regulator
L2_040_365G1_scaffold_1250_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13740..14975
DNA (1236bp) protein (412aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RPU8_9CLOT
integral membrane sensor signal transduction histidine kinase
L2_040_365G1_scaffold_1250_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15140..16180
DNA (1041bp) protein (347aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RPV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17075.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Putative cell wall binding repeat.
L2_040_365G1_scaffold_1250_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16423..17367)
DNA (945bp) protein (315aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RPV1_9CLOT
Glucokinase {ECO:0000313|EMBL:ENZ37127.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
ROK family glucokinase
L2_040_365G1_scaffold_1250_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17402..18691)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=R0BZL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ37128.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L2_040_365G1_scaffold_1250_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18795..20381)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RPV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17078.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
LysM domain.
L2_040_365G1_scaffold_1250_20
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20441..20950)
DNA (510bp) protein (170aa)
Uncharacterized protein n=12 Tax=Clostridium RepID=A8RPV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63021.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
sporulation protein YyaC
L2_040_365G1_scaffold_1250_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21282..22202)
DNA (921bp) protein (307aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RPV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17081.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
dTDP-glucose pyrophosphorylase
L2_040_365G1_scaffold_1250_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22253..23575)
DNA (1323bp) protein (441aa)
Succinyl-diaminopimelate desuccinylase n=3 Tax=Clostridium bolteae RepID=R0ADG1_9CLOT
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:ENZ36558.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
peptidase M20
L2_040_365G1_scaffold_1250_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23608..24651)
DNA (1044bp) protein (348aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Ribonucleotide reductase, beta subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=4 Tax=Clostridium bolteae RepID=A8RPW0_9CLOT
L2_040_365G1_scaffold_1250_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24699..25994)
DNA (1296bp) protein (432aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=4 Tax=Clostridium bolteae RepID=A8RPW2_9CLOT
Displaying 24 items

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