ggKbase home page

L2_040_365G1_scaffold_1292

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_1292_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..117)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5M0M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98855.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_1292_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

277..498
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78702.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_1292_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

716..1453
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78045.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_1292_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1517..1846)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78046.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Small, acid-soluble spore proteins, alpha/beta type.
L2_040_365G1_scaffold_1292_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2136..2531
DNA (396bp) protein (132aa)
Methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Ruminococcus RepID=C6J9A4_9FIRM
Methylglyoxal synthase {ECO:0000313|EMBL:EES78047.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_1292_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2510..3079
DNA (570bp) protein (190aa)
RsmD family RNA methyltransferase n=2 Tax=Ruminococcus RepID=C6J9A5_9FIRM
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EES78048.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNA methyltransferase, RsmD family
L2_040_365G1_scaffold_1292_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3206..3700
DNA (495bp) protein (165aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
pantetheine-phosphate adenylyltransferase, bacterial (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=2 Tax=Ruminococcus RepID=C6J9A6_9FIRM
L2_040_365G1_scaffold_1292_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3759..4391
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78050.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_040_365G1_scaffold_1292_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4500..5426)
DNA (927bp) protein (309aa)
Sporulation integral membrane protein YlbJ n=2 Tax=Ruminococcus RepID=C6J9A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76737.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_040_365G1_scaffold_1292_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5596..7047
DNA (1452bp) protein (484aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Aminoacyl-histidine dipeptidase n=2 Tax=Ruminococcus RepID=C6J9A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76738.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_040_365G1_scaffold_1292_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7247..8059
DNA (813bp) protein (271aa)
hypothetical protein (EC:2.7.6.5)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78053.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_1292_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8162..10108
DNA (1947bp) protein (649aa)
UPF0313 protein RSAG_00011 n=2 Tax=Ruminococcus RepID=C6J9B1_9FIRM
UPF0313 protein BN806_01374 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Fe-S oxidoreductase
L2_040_365G1_scaffold_1292_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10105..10758
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78055.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_040_365G1_scaffold_1292_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10840..11865
DNA (1026bp) protein (342aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
RluA family pseudouridine synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9B3_9FIRM
L2_040_365G1_scaffold_1292_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11825..12349
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
signal peptidase I . Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Ruminococcus RepID=C6J9B4_9FIRM
L2_040_365G1_scaffold_1292_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12375..12908
DNA (534bp) protein (178aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Holliday junction resolvase RecU n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9B5_9FIRM
Penicillin-binding protein-related factor A, putative recombinase
L2_040_365G1_scaffold_1292_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13849..14967
DNA (1119bp) protein (373aa)
ATP phosphoribosyltransferase regulatory subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9B6_9FIRM
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_1292_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14971..15618
DNA (648bp) protein (216aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase n=2 Tax=Ruminococcus RepID=C6J9B7_9FIRM
L2_040_365G1_scaffold_1292_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15621..16925
DNA (1305bp) protein (435aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=2 Tax=Ruminococcus RepID=C6J9B8_9FIRM
L2_040_365G1_scaffold_1292_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17033..17620
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Ruminococcus RepID=C6J9B9_9FIRM
L2_040_365G1_scaffold_1292_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17678..18031
DNA (354bp) protein (118aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphoribosyl-ATP pyrophosphohydrolase (EC:3.6.1.31 3.5.4.19 4.1.3.-)
Phosphoribosyl-AMP cyclohydrolase n=2 Tax=Ruminococcus RepID=C6J9C0_9FIRM
L2_040_365G1_scaffold_1292_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18596..19993
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78064.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cobalamin biosynthesis protein CbiK, Co2+ chelatase
L2_040_365G1_scaffold_1292_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20318..21337
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78038.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_040_365G1_scaffold_1292_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21362..22555
DNA (1194bp) protein (398aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78040.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
periplasmic binding protein
L2_040_365G1_scaffold_1292_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22695..23714
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78042.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transporter permease
L2_040_365G1_scaffold_1292_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23793..24950
DNA (1158bp) protein (386aa)
iron ABC transporter ATPase (EC:3.6.3.34)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78044.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Displaying 26 items

View Taxonomy