ggKbase home page

L2_040_365G1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_13_1
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

204..1103
DNA (900bp) protein (300aa)
Cof-like hydrolase n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J0V6_9BACT
Cof-like hydrolase {ECO:0000313|EMBL:CDB56293.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
cof family hydrolase
L2_040_365G1_scaffold_13_2
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1139..1321
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Akkermansia RepID=B2ULI4_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05371.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_040_365G1_scaffold_13_3
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1721..2101
DNA (381bp) protein (127aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
NADH-quinone oxidoreductase subunit A n=2 Tax=Akkermansia RepID=B2ULI5_AKKM8
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
L2_040_365G1_scaffold_13_4
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2322..3482
DNA (1161bp) protein (387aa)
Major facilitator superfamily MFS_1 n=2 Tax=Akkermansia RepID=B2ULI6_AKKM8
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACD05373.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_040_365G1_scaffold_13_5
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3466..4992)
DNA (1527bp) protein (509aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXB6_9CLOT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDO60413.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_040_365G1_scaffold_13_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4989..5348)
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BS71_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI81004.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
toxin-antitoxin system
L2_040_365G1_scaffold_13_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5755..7239)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BK83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72640.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_040_365G1_scaffold_13_8
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7233..9281)
DNA (2049bp) protein (683aa)
Type I restriction-modification system M subunit n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6IW68_9BACT
Type I restriction-modification system M subunit {ECO:0000313|EMBL:CDB54603.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
type I restriction-modification system methyltransferase subunit
L2_040_365G1_scaffold_13_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10431..10679)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BT06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75375.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_040_365G1_scaffold_13_10
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11224..11604)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Akkermansia RepID=B2ULI8_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05375.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_040_365G1_scaffold_13_11
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11691..13838
DNA (2148bp) protein (716aa)
UvrABC system protein B n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6K0L5_9BACT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
excinuclease ABC subunit B
L2_040_365G1_scaffold_13_12
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


14356..14565
DNA (210bp) protein (70aa)
50S ribosomal protein L35 n=3 Tax=Akkermansia RepID=B2ULJ0_AKKM8
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_040_365G1_scaffold_13_13
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


14715..15098
DNA (384bp) protein (128aa)
50S ribosomal protein L20 n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6JAZ5_9BACT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
rplT; 50S ribosomal protein L20
L2_040_365G1_scaffold_13_14
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15717..17162
DNA (1446bp) protein (482aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
Peptidase M50 n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J3K5_9BACT
peptidase M50
L2_040_365G1_scaffold_13_15
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17196..18581
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6JDG5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDB55851.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
hypothetical protein
L2_040_365G1_scaffold_13_16
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18844..19632
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6IZP7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDB55853.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
hypothetical protein
L2_040_365G1_scaffold_13_17
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19845..23009)
DNA (3165bp) protein (1055aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
UvrD/REP helicase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2ULJ5_AKKM8
UvrD/REP helicase
L2_040_365G1_scaffold_13_18
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(23011..25884)
DNA (2874bp) protein (958aa)
ATP-dependent nuclease subunit B-like protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J3K8_9BACT
ATP-dependent nuclease subunit B-like protein {ECO:0000313|EMBL:CDB55855.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
ATP-dependent nuclease subunit B-like protein
L2_040_365G1_scaffold_13_19
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26107..27024)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6JDH0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDB55856.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
hypothetical protein
L2_040_365G1_scaffold_13_20
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(27365..33739)
DNA (6375bp) protein (2125aa)
Alpha-2-macroglobulin domain protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2ULJ9_AKKM8
Alpha-2-macroglobulin domain protein {ECO:0000313|EMBL:ACD05386.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
alpha-2-macroglobulin domain-containing protein
L2_040_365G1_scaffold_13_21
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(33877..35064)
DNA (1188bp) protein (396aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6IZQ7_9BACT
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:CDB55863.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
L2_040_365G1_scaffold_13_22
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

35949..36515
DNA (567bp) protein (189aa)
Methylated-DNA/protein-cysteine methyltransferase n=2 Tax=Akkermansia RepID=B2ULK1_AKKM8
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:CDB55864.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
methylated-DNA--protein-cysteine methyltransferase
L2_040_365G1_scaffold_13_23
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(36662..37114)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J3L9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDB55865.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
hypothetical protein
L2_040_365G1_scaffold_13_24
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(37226..37747)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Akkermansia RepID=B2ULK3_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05390.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_040_365G1_scaffold_13_25
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(37828..38736)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6K0N9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB55867.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
L2_040_365G1_scaffold_13_26
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

38861..39529
DNA (669bp) protein (223aa)
Peptidase M22 glycoprotease n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2ULK5_AKKM8
peptidase M22 glycoprotease
Peptidase M22 glycoprotease {ECO:0000313|EMBL:ACD05392.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_040_365G1_scaffold_13_27
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

39602..40744
DNA (1143bp) protein (381aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
Citrate synthase n=2 Tax=Akkermansia RepID=B2ULK6_AKKM8
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_040_365G1_scaffold_13_28
unknown

Not on your lists

40908..41003
DNA (96bp) protein (32aa)

This feature has no annotations

L2_040_365G1_scaffold_13_29
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(41172..41636)
DNA (465bp) protein (155aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Akkermansia RepID=B2ULK7_AKKM8
tRNA/rRNA methyltransferase SpoU
L2_040_365G1_scaffold_13_30
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

41717..42280
DNA (564bp) protein (188aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2ULK8_AKKM8
DEAD/DEAH box helicase
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACD05395.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Displaying items 1-30 of 173 in total

View Taxonomy