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L2_040_365G1_scaffold_153

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_153_1
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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93..914
DNA (822bp) protein (274aa)
membrane protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B36249
Membrane protein {ECO:0000313|EMBL:KFI78738.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
membrane protein
L2_040_365G1_scaffold_153_2
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1014..1274)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B75685
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
L2_040_365G1_scaffold_153_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1428..3308
DNA (1881bp) protein (627aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
elongation factor 4 n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B2F488
GTP-binding protein LepA
L2_040_365G1_scaffold_153_4
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3316..4515
DNA (1200bp) protein (400aa)
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:KFI78735.1}; EC=1.3.99.22 {ECO:0000313|EMBL:KFI78735.1};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
coproporphyrinogen III oxidase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B740C4
coproporphyrinogen III oxidase
L2_040_365G1_scaffold_153_5
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4770..9338
DNA (4569bp) protein (1523aa)
glutamate synthase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B60F6E
Glutamate synthase {ECO:0000313|EMBL:AIZ16333.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
glutamate synthase
L2_040_365G1_scaffold_153_6
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9340..10875
DNA (1536bp) protein (512aa)
gltD; glutamate synthase (EC:1.4.1.13)
Glutamate synthase {ECO:0000313|EMBL:AIZ16332.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AIZ16332.1};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Glutamate synthase subunit beta n=1 Tax=Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8) RepID=I1WA20_BIFAR
L2_040_365G1_scaffold_153_7
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10958..11416
DNA (459bp) protein (153aa)
membrane protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6080D
membrane protein
Membrane protein {ECO:0000313|EMBL:AIZ16331.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_153_8
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11529..12026)
DNA (498bp) protein (166aa)
bacterioferritin comigratory protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B47BA9
thioredoxin peroxidase
Thioredoxin peroxidase {ECO:0000313|EMBL:AIZ16330.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_153_9
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12099..12965
DNA (867bp) protein (289aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI78730.1}; EC=3.6.3.31 {ECO:0000313|EMBL:KFI78730.1};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B327BB
ABC transporter ATP-binding protein
L2_040_365G1_scaffold_153_10
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13066..14151
DNA (1086bp) protein (362aa)
methyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B334D1
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AIZ16328.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_153_11
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14199..14756
DNA (558bp) protein (186aa)
phosphoglycerate mutase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B770AF
SixA {ECO:0000313|EMBL:KFI79784.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
phosphoglycerate mutase
L2_040_365G1_scaffold_153_12
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14928..17228
DNA (2301bp) protein (767aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B54D05
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
L2_040_365G1_scaffold_153_13
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17354..18190
DNA (837bp) protein (279aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
5,10-methylenetetrahydrofolate reductase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5381F
5,10-methylenetetrahydrofolate reductase
L2_040_365G1_scaffold_153_14
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18236..21352
DNA (3117bp) protein (1039aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
glutamine-synthetase adenylyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5B27E
glutamine-synthetase adenylyltransferase
L2_040_365G1_scaffold_153_15
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21496..22458
DNA (963bp) protein (321aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
aspartate carbamoyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6F763
aspartate carbamoyltransferase
L2_040_365G1_scaffold_153_16
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22458..22880
DNA (423bp) protein (141aa)
aspartate carbamoyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B576FF
Aspartate carbamoyltransferase regulatory subunit {ECO:0000313|EMBL:KFI79779.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
aspartate carbamoyltransferase
L2_040_365G1_scaffold_153_17
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22880..24283
DNA (1404bp) protein (468aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
dihydroorotase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3879E
dihydroorotase
L2_040_365G1_scaffold_153_18
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24340..25293
DNA (954bp) protein (318aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
orotidine 5''''-phosphate decarboxylase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B49826
orotidine 5'-phosphate decarboxylase
L2_040_365G1_scaffold_153_19
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25357..26175
DNA (819bp) protein (273aa)
2-polyprenylphenol hydroxylase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B58012
2-polyprenylphenol hydroxylase
2-polyprenylphenol hydroxylase {ECO:0000313|EMBL:AIZ16319.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_153_20
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26187..27149
DNA (963bp) protein (321aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
diguanylate cyclase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6FD4B
diguanylate cyclase
L2_040_365G1_scaffold_153_21
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27189..27884
DNA (696bp) protein (232aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
orotate phosphoribosyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B61B3F
orotate phosphoribosyltransferase
L2_040_365G1_scaffold_153_22
unknown

Not on your lists

28064..28153
DNA (90bp) protein (30aa)

This feature has no annotations

L2_040_365G1_scaffold_153_23
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28386..31433
DNA (3048bp) protein (1016aa)
SNF2-related helicase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHT6_BIFBI
SNF2-related helicase {ECO:0000313|EMBL:KFI87920.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
SNF2-related helicase
L2_040_365G1_scaffold_153_24
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31430..36298
DNA (4869bp) protein (1623aa)
putative adenine-specific methylase (EC:2.1.1.72)
Putative adenine-specific methylase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHT7_BIFBI
Putative adenine-specific methylase {ECO:0000313|EMBL:KFI87919.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
L2_040_365G1_scaffold_153_25
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36295..42858
DNA (6564bp) protein (2188aa)
helicase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BE14
Putative helicase {ECO:0000313|EMBL:KFI87797.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
DEAD/DEAH box helicase
L2_040_365G1_scaffold_153_26
Bifidobacterium merycicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42855..45260
DNA (2406bp) protein (802aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=78345 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium merycicum.;"
UvrD/REP helicase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHT8_BIFBI
UvrD/REP helicase
L2_040_365G1_scaffold_153_27
unknown

Not on your lists

45404..45598
DNA (195bp) protein (65aa)

This feature has no annotations

L2_040_365G1_scaffold_153_28
Bifidobacterium choerinum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45920..47188
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3875E
Uncharacterized protein {ECO:0000313|EMBL:KFI57625.1}; TaxID=35760 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium choerinum.;"
hypothetical protein
L2_040_365G1_scaffold_153_29
Bifidobacterium choerinum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47185..47382
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI57624.1}; TaxID=35760 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium choerinum.;"
L2_040_365G1_scaffold_153_30
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47446..47883
DNA (438bp) protein (146aa)
N-acetyltransferase GCN5 n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B442D9
GNAT family acetyltransferase {ECO:0000313|EMBL:KFI79772.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
GCN5 family acetyltransferase
Displaying items 1-30 of 55 in total

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