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L2_040_365G1_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_160_1
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6459..6749)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S6N3_9BIFI
CRISPR-associated protein Cas2
L2_040_365G1_scaffold_160_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6755..7786)
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
CRISPR-associated endonuclease Cas1 n=2 Tax=Bifidobacterium adolescentis RepID=A1A2M8_BIFAA
cas1; CRISPR-associated DNA polymerase
L2_040_365G1_scaffold_160_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7783..8478)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2M9_BIFAA
cas4; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39962.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_040_365G1_scaffold_160_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8488..9411)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2X2_BIFBR
CRISPR-associated protein
CRISPR-associated protein {ECO:0000313|EMBL:AHJ19772.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_040_365G1_scaffold_160_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9471..11294)
DNA (1824bp) protein (608aa)
CRISPR-associated protein, Csd1 family n=2 Tax=Oscillibacter RepID=U2QK61_9FIRM
CRISPR-associated protein, Csd1 famil
CRISPR-associated protein, Csd1 famil {ECO:0000313|EMBL:AHJ19773.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_040_365G1_scaffold_160_6
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11291..11944)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY65_ROSHA
CRISPR-associated protein Cas5, subtype I-C/DVULG {ECO:0000313|EMBL:KJY63745.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
CRISPR-associated protein
L2_040_365G1_scaffold_160_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12180..14558)
DNA (2379bp) protein (793aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2X1_BIFBR
CRISPR-associated helicase Cas3
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:AHJ19775.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_040_365G1_scaffold_160_8
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14683..15954)
DNA (1272bp) protein (424aa)
Possible glutamate--cysteine ligase n=6 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DWG3_BIFA0
gamma-glutamylcysteine synthetase
Gamma-glutamylcysteine synthetase {ECO:0000313|EMBL:AIZ16700.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_9
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16027..20748)
DNA (4722bp) protein (1574aa)
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:KFI77683.1}; EC=1.3.7.8 {ECO:0000313|EMBL:KFI77683.1};; EC=1.3.99.- {ECO:0000313|EMBL:KFI77683.1};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
activase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5516A
activase
L2_040_365G1_scaffold_160_10
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21000..21932
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B589C3
M-like protein Szp3 {ECO:0000313|EMBL:KFI77682.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
hypothetical protein
L2_040_365G1_scaffold_160_11
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21946..22647)
DNA (702bp) protein (234aa)
ribonucleoside-triphosphate reductase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5958B
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:KFI77681.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
ribonucleoside-triphosphate reductase activating protein
L2_040_365G1_scaffold_160_12
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22755..25148)
DNA (2394bp) protein (798aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KFI77680.1}; EC=1.17.4.2 {ECO:0000313|EMBL:KFI77680.1};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
ribonucleoside-triphosphate reductase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5BDEF
ribonucleoside-triphosphate reductase
L2_040_365G1_scaffold_160_13
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25507..26799
DNA (1293bp) protein (431aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
exodeoxyribonuclease VII large subunit n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5183C
exodeoxyribonuclease VII large subunit
L2_040_365G1_scaffold_160_14
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26869..27207
DNA (339bp) protein (113aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
exonuclease VII small subunit n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B69275
exonuclease VII small subunit
L2_040_365G1_scaffold_160_15
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27216..28232)
DNA (1017bp) protein (339aa)
endonuclease n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B653A2
endonuclease
Endonuclease {ECO:0000313|EMBL:AIZ16707.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_16
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28602..29321
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5C3A2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16708.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_17
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29330..30298)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B41640
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:AIZ16709.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_18
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30325..31545)
DNA (1221bp) protein (407aa)
Putative aspartate transaminase {ECO:0000313|EMBL:KFI77588.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KFI77588.1};; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
aspartate aminotransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6A5DB
aminotransferase
L2_040_365G1_scaffold_160_19
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31713..32780
DNA (1068bp) protein (356aa)
oxidoreductase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B57896
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AIZ16711.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_20
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32988..34436
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B41CCF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16712.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_21
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34452..35933)
DNA (1482bp) protein (494aa)
peptidase S10 n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5A69D
Carboxypeptidase C {ECO:0000313|EMBL:KFI77585.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
carboxypeptidase C
L2_040_365G1_scaffold_160_22
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35969..38077)
DNA (2109bp) protein (703aa)
amino acid transporter n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B41562
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AIZ16713.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_23
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38134..39492)
DNA (1359bp) protein (453aa)
aminopeptidase C n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3EA1D
peptidase C1
Peptidase C1 {ECO:0000313|EMBL:AIZ16714.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_24
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39540..40898)
DNA (1359bp) protein (453aa)
peptidase C45 n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B576CE
peptidase C45
Peptidase C45 {ECO:0000313|EMBL:AIZ16715.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_25
unknown

Not on your lists

comp(41017..41175)
DNA (159bp) protein (53aa)

This feature has no annotations

L2_040_365G1_scaffold_160_26
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41225..41872)
DNA (648bp) protein (216aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
peptide deformylase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B62836
peptide deformylase
L2_040_365G1_scaffold_160_27
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41929..43311)
DNA (1383bp) protein (461aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
phosphoglucosamine mutase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B38F9E
phosphoglucosamine mutase
L2_040_365G1_scaffold_160_28
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43498..46125)
DNA (2628bp) protein (876aa)
aminopeptidase N n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B2EC28
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:AIZ16718.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_29
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46240..48168)
DNA (1929bp) protein (643aa)
ribonuclease n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B76F55
ribonuclease
Ribonuclease {ECO:0000313|EMBL:AIZ16719.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_160_30
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48257..49147)
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
dihydrodipicolinate synthase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B585E6
dihydrodipicolinate synthase
Displaying items 1-30 of 44 in total

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