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L2_040_365G1_scaffold_342

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_342_1
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(461..1564)
DNA (1104bp) protein (368aa)
Permease n=10 Tax=Bifidobacterium animalis subsp. lactis RepID=C6A9K1_BIFLB
Receptor protein {ECO:0000313|EMBL:KFI80708.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
permease
L2_040_365G1_scaffold_342_2
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1673..3445)
DNA (1773bp) protein (591aa)
oxalyl-CoA decarboxylase (EC:4.1.1.8)
Oxalyl-CoA decarboxylase {ECO:0000313|EMBL:AIZ16815.1}; EC=4.1.1.8 {ECO:0000313|EMBL:AIZ16815.1};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Oxalyl-CoA decarboxylase n=14 Tax=Bifidobacterium animalis RepID=D3R6V8_BIFAB
L2_040_365G1_scaffold_342_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3521..5020)
DNA (1500bp) protein (500aa)
voltage-gated chloride channel n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B347C0
chloride channel protein
Chloride channel protein {ECO:0000313|EMBL:AIZ16816.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_4
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5082..6947)
DNA (1866bp) protein (622aa)
peptidase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B507AD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ17104.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_5
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7453..9618
DNA (2166bp) protein (722aa)
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6D01F
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000313|EMBL:AIZ16817.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_6
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9697..10218
DNA (522bp) protein (174aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
inorganic pyrophosphatase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B57106
inorganic pyrophosphatase
L2_040_365G1_scaffold_342_7
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10345..11097)
DNA (753bp) protein (251aa)
transporter n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4D7B1
membrane protein
Membrane protein {ECO:0000313|EMBL:AIZ16819.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_8
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11365..12090
DNA (726bp) protein (242aa)
transcriptional regulator n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B35694
Transcriptional regulator {ECO:0000313|EMBL:KFI80715.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
transcriptional regulator
L2_040_365G1_scaffold_342_9
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12167..12910
DNA (744bp) protein (248aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
endonuclease III n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B666DF
endonuclease III
L2_040_365G1_scaffold_342_10
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12922..14439
DNA (1518bp) protein (506aa)
ABC transporter substrate-binding protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B46A28
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIZ16821.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_11
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14512..15021)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4F69F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ17105.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_12
unknown

Not on your lists

comp(15057..15662)
DNA (606bp) protein (202aa)

This feature has no annotations

L2_040_365G1_scaffold_342_13
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15891..18683
DNA (2793bp) protein (931aa)
valS; valine--tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
valyl-tRNA synthetase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B47C6E
L2_040_365G1_scaffold_342_14
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18766..20778)
DNA (2013bp) protein (671aa)
tubuliform spidroin n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B63E7F
membrane protein
Membrane protein {ECO:0000313|EMBL:AIZ16823.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_15
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20819..21244)
DNA (426bp) protein (142aa)
chorismate mutase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B653FA
chorismate mutase
Chorismate mutase {ECO:0000313|EMBL:AIZ16824.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_16
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21258..21632)
DNA (375bp) protein (125aa)
AsnC family transcriptional regulator n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5A0EE
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AIZ16825.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_17
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21920..23788)
DNA (1869bp) protein (623aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
transcription termination factor Rho n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B397F1
transcription termination factor Rho
L2_040_365G1_scaffold_342_18
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24055..25644)
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3084A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16827.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_19
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25838..26149)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B44234
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16828.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_20
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26174..27211)
DNA (1038bp) protein (346aa)
GNAT family acetyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B52D91
GNAT family acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:AIZ16829.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_21
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27382..28881)
DNA (1500bp) protein (500aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
aspartyl/glutamyl-tRNA amidotransferase subunit B n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4169B
glutamyl-tRNA amidotransferase
L2_040_365G1_scaffold_342_22
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28901..30439)
DNA (1539bp) protein (513aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
glutamyl-tRNA amidotransferase subunit A n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B577A5
glutamyl-tRNA amidotransferase
L2_040_365G1_scaffold_342_23
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30441..30656)
DNA (216bp) protein (72aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
glutamyl-tRNA amidotransferase subunit C n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B52F15
glutamyl-tRNA amidotransferase
L2_040_365G1_scaffold_342_24
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30776..31672)
DNA (897bp) protein (299aa)
ABC transporter permease n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6E1DC
ABC transporter permease {ECO:0000313|EMBL:KFI80729.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
ABC transporter permease
L2_040_365G1_scaffold_342_25
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31669..32634)
DNA (966bp) protein (322aa)
ABC transporter n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4A260
multidrug ABC transporter ATP-binding protein
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIZ16834.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_26
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32679..33497)
DNA (819bp) protein (273aa)
RNA methyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B391B9
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:AIZ16835.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_27
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33624..34235)
DNA (612bp) protein (204aa)
orotate phosphoribosyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B51ED1
orotate phosphoribosyltransferase
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:AIZ16836.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_28
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34269..35654)
DNA (1386bp) protein (462aa)
copper-exporting ATPase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B420D5
ATPase P
ATPase P {ECO:0000313|EMBL:AIZ16837.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_29
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35773..38475)
DNA (2703bp) protein (901aa)
protein disaggregation chaperone n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B36316
ATPase AAA
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_342_30
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39143..39961)
DNA (819bp) protein (273aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4A1BF
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:AIZ16839.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Displaying items 1-30 of 33 in total

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