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L2_040_365G1_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_348_1
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1002)
DNA (1002bp) protein (334aa)
ABC transporter permease n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B73828
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIZ16408.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_348_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1344..2612)
DNA (1269bp) protein (423aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CQK0_BIFBR
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI86343.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Integrase
L2_040_365G1_scaffold_348_3
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2936..3469)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1R869_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ERH29754.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
L2_040_365G1_scaffold_348_4
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3466..4167)
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Gardnerella vaginalis RepID=S4HTH7_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EPI53518.1}; TaxID=1261062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8017A.;"
rlfA; phagic protein
L2_040_365G1_scaffold_348_5
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4187..4660)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RCT7_CLAMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ17074.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_348_6
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4676..5044)
DNA (369bp) protein (123aa)
Putative transcriptional regulator n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XLQ4_9MICO
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AIZ16404.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_348_7
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5116..5646)
DNA (531bp) protein (177aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ17073.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_348_8
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5740..6213)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Scardovia wiggsiae F0424 RepID=J0DEI2_9BIFI
Putative lipoprotein {ECO:0000313|EMBL:KFI48938.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein
L2_040_365G1_scaffold_348_9
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6437..7207)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A358_BIFAA
actin
Actin {ECO:0000313|EMBL:AIZ16403.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_348_10
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7369..8454)
DNA (1086bp) protein (362aa)
Type I restriction enzyme HsdR protein N-terminal domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XUU5_9BIFI
Type I restriction enzyme HsdR protein N-terminal domain protein {ECO:0000313|EMBL:EEB21931.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR01778.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L2_040_365G1_scaffold_348_11
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8557..8871)
DNA (315bp) protein (105aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9W9_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:KFI92474.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
L2_040_365G1_scaffold_348_12
Bifidobacterium cuniculi, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9044..9295
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9W8_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:KFI65927.1}; TaxID=1688 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium cuniculi.;"
hypothetical protein
L2_040_365G1_scaffold_348_13
unknown

Not on your lists

9301..9456
DNA (156bp) protein (52aa)

This feature has no annotations

L2_040_365G1_scaffold_348_14
unknown

Not on your lists

9453..9617
DNA (165bp) protein (55aa)

This feature has no annotations

L2_040_365G1_scaffold_348_15
unknown

Not on your lists

comp(9622..9837)
DNA (216bp) protein (72aa)

This feature has no annotations

L2_040_365G1_scaffold_348_16
unknown

Not on your lists

9936..10601
DNA (666bp) protein (222aa)

This feature has no annotations

L2_040_365G1_scaffold_348_17
Acidianus hospitalis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(10619..11251)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B6H7_ACIHW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE94597.1}; TaxID=933801 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Acidianus.;" source="Acidianus hospitalis (strain W1).;"
L2_040_365G1_scaffold_348_18
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11389..11889
DNA (501bp) protein (167aa)
DNA binding domain, excisionase family {ECO:0000313|EMBL:KFI49763.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
L2_040_365G1_scaffold_348_19
unknown

Not on your lists

12008..12277
DNA (270bp) protein (90aa)

This feature has no annotations

L2_040_365G1_scaffold_348_20
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12510..12953
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00036ABBAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ17068.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_348_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12950..14005
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9X6_BIFLI
Cryptic prophage protein {ECO:0000313|EMBL:KFI69801.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_040_365G1_scaffold_348_22
unknown

Not on your lists

14002..14340
DNA (339bp) protein (113aa)

This feature has no annotations

L2_040_365G1_scaffold_348_23
unknown

Not on your lists

14337..14540
DNA (204bp) protein (68aa)

This feature has no annotations

L2_040_365G1_scaffold_348_24
unknown

Not on your lists

14537..14743
DNA (207bp) protein (69aa)

This feature has no annotations

L2_040_365G1_scaffold_348_25
Bifidobacterium cuniculi, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14933..15625
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XUJ3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI65744.1}; TaxID=1688 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium cuniculi.;"
hypothetical protein
L2_040_365G1_scaffold_348_26
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15893..16216
DNA (324bp) protein (108aa)
HNH nuclease n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSF4_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16397.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_348_27
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16359..16880
DNA (522bp) protein (174aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ17062.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_348_28
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16861..18300
DNA (1440bp) protein (480aa)
Putative phage terminase, large subunit n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XUJ0_9BIFI
Terminase {ECO:0000313|EMBL:KFI97823.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
phage-related terminase
L2_040_365G1_scaffold_348_29
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18297..19700
DNA (1404bp) protein (468aa)
Phage portal protein, SPP1 Gp6-like protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPH0_BIFBS
portal protein
Portal protein {ECO:0000313|EMBL:AIZ16396.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_348_30
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19702..19863
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XUI8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21904.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
Displaying items 1-30 of 83 in total

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