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L2_040_365G1_scaffold_481

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_481_1
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..410)
DNA (408bp) protein (136aa)
membrane protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B56059
Membrane spanning protein {ECO:0000313|EMBL:KFI79544.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
membrane protein
L2_040_365G1_scaffold_481_2
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(596..1147)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8) RepID=I1W9A7_BIFAR
Uncharacterized protein {ECO:0000313|EMBL:KFI78469.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
hypothetical protein
L2_040_365G1_scaffold_481_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1405..1977
DNA (573bp) protein (191aa)
elongation factor P n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B431E8
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
elongation factor P
L2_040_365G1_scaffold_481_4
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2004..2432
DNA (429bp) protein (143aa)
nitrogen utilization protein B n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3885D
nitrogen utilization protein B
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_5
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2514..3746
DNA (1233bp) protein (411aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
carbamoyl phosphate synthase small subunit n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B57CAA
carbamoyl phosphate synthase small subunit
L2_040_365G1_scaffold_481_6
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3739..7122
DNA (3384bp) protein (1128aa)
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
carbamoyl phosphate synthase large subunit n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B315A8
L2_040_365G1_scaffold_481_7
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7138..8055
DNA (918bp) protein (306aa)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Bifidobacterium animalis subsp. lactis ATCC 27673 RepID=U3Q1S9_BIFAN
orotidine 5'-phosphate decarboxylase
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:AIZ16098.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_8
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8052..8651
DNA (600bp) protein (200aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Guanylate kinase n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R4H9_BIFAB
guanylate kinase
L2_040_365G1_scaffold_481_9
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8757..10592)
DNA (1836bp) protein (612aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B55CCF
L2_040_365G1_scaffold_481_10
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10797..11081
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5BCBF
DNA-directed RNA polymerase subunit omega
L2_040_365G1_scaffold_481_11
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11244..12470
DNA (1227bp) protein (409aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
S-adenosylmethionine synthase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B36D78
L2_040_365G1_scaffold_481_12
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12528..13811
DNA (1284bp) protein (428aa)
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4FAB7
cyclopropane-fatty-acyl-phospholipid synthase
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AIZ16103.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_13
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13831..16038
DNA (2208bp) protein (736aa)
primosome assembly protein PriA n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B524E7
Primosome assembly protein PriA {ECO:0000313|EMBL:AIZ16104.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
primosome assembly protein PriA
L2_040_365G1_scaffold_481_14
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16130..17098
DNA (969bp) protein (323aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
methionyl-tRNA formyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6BDBE
methionyl-tRNA formyltransferase
L2_040_365G1_scaffold_481_15
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17120..17737)
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BPN7_9BIFI
phosphoserine phosphatase
Phosphoserine phosphatase {ECO:0000313|EMBL:AIZ16106.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_16
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17841..18548
DNA (708bp) protein (236aa)
membrane protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3AF48
membrane protein
Membrane protein {ECO:0000313|EMBL:AIZ16107.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_17
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18651..20222
DNA (1572bp) protein (524aa)
ATPase AAA n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7561D
ATPase AAA
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_18
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20219..21799
DNA (1581bp) protein (527aa)
ligase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B65675
Ligase {ECO:0000313|EMBL:AIZ16109.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
ligase
L2_040_365G1_scaffold_481_19
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21945..22817
DNA (873bp) protein (291aa)
inositol monophosphatase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B50AAA
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:AIZ16110.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_20
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22854..23039
DNA (186bp) protein (62aa)
ubiquitin n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B70B4C
ubiquitin
Ubiquitin {ECO:0000313|EMBL:AIZ16111.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_21
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23039..24493
DNA (1455bp) protein (485aa)
Pup--protein ligase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B36DCB
Pup--protein ligase
Pup--protein ligase {ECO:0000313|EMBL:AIZ16112.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_22
Bifidobacterium choerinum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24583..24864)
DNA (282bp) protein (94aa)
transcriptional regulator n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6A404
integration host factor
Integration host factor {ECO:0000313|EMBL:KFI58392.1}; TaxID=35760 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium choerinum.;"
L2_040_365G1_scaffold_481_23
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25024..27501)
DNA (2478bp) protein (826aa)
membrane protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B50E5B
Membrane protein {ECO:0000313|EMBL:KFI78490.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
membrane protein
L2_040_365G1_scaffold_481_24
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27664..29106)
DNA (1443bp) protein (481aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000313|EMBL:AIZ16115.1}; EC=4.3.2.2 {ECO:0000313|EMBL:AIZ16115.1};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
adenylosuccinate lyase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6576D
L2_040_365G1_scaffold_481_25
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29177..29800)
DNA (624bp) protein (208aa)
alpha/beta hydrolase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3A1C6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16116.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_26
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29740..30657)
DNA (918bp) protein (306aa)
alpha/beta hydrolase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3A1C6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16116.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_27
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30654..31019)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B37C83
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ17029.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_28
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31190..31744)
DNA (555bp) protein (185aa)
cell surface protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B39735
cell surface protein
Cell surface protein {ECO:0000313|EMBL:AIZ16117.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_29
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31741..32766)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3274E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16118.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_481_30
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32763..33815)
DNA (1053bp) protein (351aa)
von Willebrand factor A n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7B835
von Willebrand factor A
von Willebrand factor A {ECO:0000313|EMBL:AIZ16119.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Displaying items 1-30 of 32 in total

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