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L2_040_365G1_scaffold_657

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_657_1
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10..666)
DNA (657bp) protein (219aa)
clpP; Clp protease (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B70B42
L2_040_365G1_scaffold_657_2
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(669..1280)
DNA (612bp) protein (204aa)
Clp protease (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
ATP-dependent Clp protease ClpP n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6D65E
L2_040_365G1_scaffold_657_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1308..2699)
DNA (1392bp) protein (464aa)
chloride channel protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5D08F
Chloride channel protein {ECO:0000313|EMBL:KFI77516.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
chloride channel protein
L2_040_365G1_scaffold_657_4
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2827..4215)
DNA (1389bp) protein (463aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
trigger factor n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4C487
trigger factor
L2_040_365G1_scaffold_657_5
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4265..5551)
DNA (1287bp) protein (429aa)
ribonuclease D n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B48552
ribonuclease D
Ribonuclease D {ECO:0000313|EMBL:AIZ16493.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_657_6
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5659..6549)
DNA (891bp) protein (297aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
pyruvate formate lyase-activating protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B75B9D
pyruvate formate lyase-activating protein
L2_040_365G1_scaffold_657_7
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6692..9067)
DNA (2376bp) protein (792aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4A1AF
formate acetyltransferase
Formate acetyltransferase {ECO:0000313|EMBL:AIZ16495.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_657_8
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9250..9444)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B41054
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16496.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_657_9
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9505..11199)
DNA (1695bp) protein (565aa)
NAD+ synthetase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B50FD2
NAD+ synthetase
NAD+ synthetase {ECO:0000313|EMBL:AIZ16497.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_657_10
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11247..12419)
DNA (1173bp) protein (391aa)
N-acyl-L-amino acid amidohydrolase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B33E23
N-acyl-L-amino acid amidohydrolase
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:AIZ16498.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_657_11
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12465..13169)
DNA (705bp) protein (235aa)
methionine ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B77E81
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI77524.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
methionine ABC transporter ATP-binding protein
L2_040_365G1_scaffold_657_12
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13166..14425)
DNA (1260bp) protein (420aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
ABC transporter n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6AE5D
methionine ABC transporter ATP-binding protein
L2_040_365G1_scaffold_657_13
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14564..15547)
DNA (984bp) protein (328aa)
ABC transporter substrate-binding protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B79C60
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI77526.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
ABC transporter substrate-binding protein
L2_040_365G1_scaffold_657_14
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15844..16659
DNA (816bp) protein (272aa)
COF family hydrolase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7877B
hydrolase
Hydrolase {ECO:0000313|EMBL:AIZ16502.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_657_15
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16729..17265
DNA (537bp) protein (179aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
peptidyl-prolyl cis-trans isomerase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5E1D7
peptidylprolyl isomerase
L2_040_365G1_scaffold_657_16
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17290..19623)
DNA (2334bp) protein (778aa)
(p)ppGpp synthetase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B41F38
GTP pyrophosphokinase
GTP pyrophosphokinase {ECO:0000313|EMBL:AIZ16504.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_657_17
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19743..20213)
DNA (471bp) protein (157aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B642C5
deoxyuridine 5'-triphosphate nucleotidohydrolase
L2_040_365G1_scaffold_657_18
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20213..20506)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B57556
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16506.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_657_19
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20650..21654
DNA (1005bp) protein (335aa)
DNA-binding protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B789EC
DNA-binding protein {ECO:0000313|EMBL:KFI77532.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
hypothetical protein
L2_040_365G1_scaffold_657_20
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21667..22947)
DNA (1281bp) protein (427aa)
nucleotide pyrophosphatase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B60BC0
nucleotide pyrophosphatase
Nucleotide pyrophosphatase {ECO:0000313|EMBL:AIZ16508.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_657_21
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23097..25760
DNA (2664bp) protein (888aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
DNA topoisomerase IV subunit A n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3442D
DNA topoisomerase IV subunit A
L2_040_365G1_scaffold_657_22
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25813..26805)
DNA (993bp) protein (331aa)
glucose transporter n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B35420
Putative glucose uptake permease {ECO:0000313|EMBL:KFI79957.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
glucose transporter
Displaying 22 items

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