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L2_040_365G1_scaffold_906

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_906_1
Bifidobacterium choerinum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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252..917
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bifidobacterium animalis subsp. lactis ATCC 27673 RepID=U3Q0S6_BIFAN
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:KFI58008.1}; TaxID=35760 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium choerinum.;"
L2_040_365G1_scaffold_906_2
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1116..2450)
DNA (1335bp) protein (445aa)
formyl-coenzyme A transferase (EC:2.8.3.16)
Formyl-CoA:oxalate CoA-transferase {ECO:0000256|HAMAP-Rule:MF_00742}; Short=FCOCT {ECO:0000256|HAMAP-Rule:MF_00742};; EC=2.8.3.16 {ECO:0000256|HAMAP-Rule:MF_00742};; Formyl-coenzyme A transferase {ECO:0000256|HAMAP-Rule:MF_00742}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
Formyl-CoA transferase n=14 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DWT9_BIFA0
L2_040_365G1_scaffold_906_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2855..3898
DNA (1044bp) protein (348aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
homoserine O-succinyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7997D
homoserine O-succinyltransferase
L2_040_365G1_scaffold_906_4
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4118..4930
DNA (813bp) protein (271aa)
F0F1 ATP synthase subunit A n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B57300
ATP synthase F0F1 subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_906_5
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4987..5217
DNA (231bp) protein (77aa)
ATP synthase subunit C (EC:3.6.3.14)
ATP synthase subunit c n=14 Tax=Bifidobacterium animalis RepID=ATPL_BIFA0
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
L2_040_365G1_scaffold_906_6
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5276..5803
DNA (528bp) protein (176aa)
F0F1 ATP synthase subunit B n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B495D4
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
ATP synthase F0F1 subunit B
L2_040_365G1_scaffold_906_7
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5834..6667
DNA (834bp) protein (278aa)
F0F1 ATP synthase subunit delta n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6E65F
ATP synthase F0F1 subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_906_8
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6743..8404
DNA (1662bp) protein (554aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
F0F1 ATP synthase subunit alpha n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B76247
ATP synthase F0F1 subunit alpha
L2_040_365G1_scaffold_906_9
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8408..9328
DNA (921bp) protein (307aa)
F0F1 ATP synthase subunit gamma n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B69282
ATP synthase F0F1 subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_906_10
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9338..10825
DNA (1488bp) protein (496aa)
ATP F0F1 synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
ATP synthase subunit beta n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4F7CC
L2_040_365G1_scaffold_906_11
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10828..11127
DNA (300bp) protein (100aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase F0F1 subunit epsilon {ECO:0000313|EMBL:AIZ16804.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AIZ16804.1};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
F0F1 ATP synthase subunit epsilon n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6B604
L2_040_365G1_scaffold_906_12
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11231..11935
DNA (705bp) protein (235aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B68A2A
hypothetical protein
L2_040_365G1_scaffold_906_13
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11975..12952)
DNA (978bp) protein (326aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
peptidylprolyl isomerase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4DAB6
peptidylprolyl isomerase
L2_040_365G1_scaffold_906_14
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13101..14297
DNA (1197bp) protein (399aa)
GTPase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B304FB
GTPase
GTPase {ECO:0000313|EMBL:AIZ16801.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_906_15
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14297..15301
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4A8B8
Uncharacterized protein {ECO:0000313|EMBL:KFI80694.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
hypothetical protein
L2_040_365G1_scaffold_906_16
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15390..16340
DNA (951bp) protein (317aa)
thioredoxin n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B45721
thioredoxin
Thioredoxin {ECO:0000313|EMBL:AIZ16799.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_906_17
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16475..17122)
DNA (648bp) protein (216aa)
adenylate cyclase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3A531
Adenylate cyclase {ECO:0000313|EMBL:KFI80692.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
hypothetical protein
L2_040_365G1_scaffold_906_18
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17447..17848
DNA (402bp) protein (134aa)
endoribonuclease L-PSP n=2 Tax=Bifidobacterium pseudolongum RepID=UPI0003B624AB
regulator
Regulator {ECO:0000313|EMBL:AIZ16797.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L2_040_365G1_scaffold_906_19
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17925..19577
DNA (1653bp) protein (551aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
arginyl-tRNA synthetase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B57CD5
arginyl-tRNA synthetase
Displaying 19 items

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