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L2_040_365G1_scaffold_688_1

Organism: dasL2_040_365G1_concoct_72_fa

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(2..3415)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 1138.0
  • Bit_score: 2230
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B590BE similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 1138.0
  • Bit_score: 2230
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 1124.0
  • Bit_score: 2205
  • Evalue 0.0

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Taxonomy

Bifidobacterium pseudolongum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3414
ATGCCCGCTGACCGAGACACCCGCACCCCGGAAGACGAGCTCATCGCGGGCTCCCTCGGCGACGTGCGCGAGGCGCTCGCCCGCGACCCGCAGTTCGCGGCGCTCGCGCACGGCGAGATCGAAACGCCCGACGACGCCACCGACCCAAGCCTGCTCATCGGCGCACCGCAAGGCATACGCCCGGCGCTCGCCGCCGCCACCGCCGAACGCGCGCCCGTCGTCGTAATCGTCCCCTCCGGCCGTGAGGCGGAGGAGCTCGTCGAAGACATCCGATCGTGGTACCGCGGCGACCCCGCGTCGGTCGCCCAACTGCAGTCATGGGAGACGCTGCCGCACGAGCGTCTTTCGCCGCGCGCGGACACCGTGGCCAACCGCATGGAAGTGTTCCGCCGCCTGTGCCACCCGCAGCAGGGCAGTGCCATGTTCGGCCCCATCCGCATCCTCATCATGCCTGTGCGCTCACTCATCCAGCCAGTTGTCGCCGGCATCGGCGACGTCGCACCGCTTGTCTTCACATGCGGCGGGGAGATGCCGCTCGACACCGCAGCACAGCAGCTCGTGCGCAACGCCTATACGCGCGTCGACCTGGTCATGGACCGCGGCGAGTTCGCAGTGCGCGGCGGCCTCATCGACGTCTTCCCGCCGACGGCGCCGCACCCTGTGCGCATCGAGTTCTTCGGCGACGAGATTGACTCGATACGCCAGTTCCACGCCTCCGACCAGCGCACCTACGGCGACGAGATCGACTCGATCTGGGCCACGCCGTGCCGCGAAGTGCAGCTGACGGACGAGATCCGAGACCGTGCACGCTCGCTTGTCGGCTCCATTCCCAATGCCGACGACATGCTCGAATCCATTGCGCAGGGCATACCCGTCGAAGGCATGGAATCGCTCATCCCCGCGCTCATCGACGAGATGCAGCCGGTCTCGTCGATGCTGCCCCGCGGCAGTGTCGTCATGCTCAGCGACCCCGAGAAACTGCGCCGCGCGGTCGACGACCTCGAGAAGACCGCGAACGAGTTCCTCGCGACCAGCTGGAGCGTCGCCGCGTCCGGCCACGGTTCGGGCGCGCCGATCACCTTCGACCAAGCGAACTTCCTCAACTACCAGGAGGCCGTCGCCCAGCTCATGTACAGCGAGCGCGAAGTGTGGCAGGTCAGTGGATTCACCGTGGACACCGCACAGCCCGGCCATGTGCAGATCGCCGCGCAGACACCGGTCGACTTCCGCGGCAGCGAGACGAAAGCGGAACAGGGCTTGCACGAACTGCTCGACAGCGGGTATGAGCTGACCCTCACCGCCGCAGCGCACGGCACACTGCAGCGTCTCAAGCGCATGCTTCATGGCATTGGCGTCACCCGGTTCGCCTGCGTGCGCTCGCAGGCGCAGGACGGGTTCATCGACACCGCCGCCAAGGTCGCGCTGCTCACCGAGCGCGATGTGACGGGACGTGCGAGCGCGGCGGGGGCGTCGCGCACCCCGCGCAAACGCCATAAGTCGATCGACCTCATGGAACTCAAGCTGGGGGATTTCGTGGTGCACGAACAACATGGCGTCGGCCGGTTCGTCGAGATGCGCCAGCGCACCACCGGCACGGGCCGCAACCAGTCGACGCGTGAATACCTCGTCATCGAATACGCGCCGAGCAAACGCAACGCGCCGCCGGACAAACTGTTCATCCCGACCGACCAGCTCGACCAGGTGAGCAAATACATCGGCGCCGAGATCCCCAAGCTCAACAAGCTCGGCGGGTCGGACTGGGCGCAGACGAAGGCCAAGGCGAAGAAACACGTCCATGAGATCGCCCAGAACCTCATCAAGCTGTATGCGGCACGCCAGCAGGCGAAAGGGTTCGCCTTCAGCAAAGACACGCCGTGGCAGAAAGAGCTCGAAGACGCGTTTCCGTATCAGGAGACCGCCGACCAGCTCACCACAATCGACGACGTGAAGGCCGACATGGAAAAGCCGATTCCAATGGACCGGCTCATCTGCGGCGACGTGGGGTTCGGCAAGACCGAAATCGCGTTGCGCGCGGCATTCAAAGCGGTGCAGGACGCCAAGCAGGTCGCCGTGCTCGTGCCGACGACCCTGCTCGTGCAGCAGCATTTCGAGACCTTCAGCGAACGCTTCGAGGGGTTCCCTGTCAAGGTGGCTGCGATGAGCCGTTTCCAGAGCACCAAAGAGATCAACGAGACGCTCAAGGGGCTCGAGGACGGCACGGTCGACGTGGTCATCGGCACGCACAAGCTGCTCAACCCCAAGGTCAAGTTCAAGGACTTGGGCCTCGTCATCATCGACGAGGAGCAGCGGTTCGGTGTAGAGGCCAAAGAGACGCTCAAGGCCATCCGCACCAACGTCGACGTGCTCAGCCTGTCGGCCACGCCGATTCCGCGCACGCTCGAAATGGCGGTGACGGGCATCCGTGAGATGTCGACGCTCGCCACACCGCCTGAGGACCGCCTGCCGGTGCTCACGTACGTCGGCGCATATGAAGATGCGCAGGTGACGGCGGCGGTGCGCCGCGAATTGCTGCGCGGCGGCCAGGTGTTCTACATCCACAACCGTGTGCAGGACATCGACCAGAAGGCGGCGCAATTGCGCGAACTCGTGCCGGAGGCGCGCATCGGGATCGCCCACGGCAAGATGGGGCGCAAGCAGCTCGACCAGATCATCCGCGACTTCTGGCACCGCGACATCGACGTGCTGTTGTGCACCACGATCGTGGAGACCGGCCTCGATATCTCGAACGCCAACACACTGATCGTCGACAACGCGGGCAAATTCGGCCTCAGCCAGCTCCACCAGCTGCGTGGGCGCGTCGGCCGCGGCCATGACCGCGCCTACGCGTATTTCCTGTACGACCCGAGCAAGCCGATGACCGAGCAGTCGCACGAGCGCCTCGTCACGATCGCCCAGCACACCGCGCTTGGCTCCGGATTCGACGTGGCGATGAAGGACCTTGAGTTGCGCGGCACCGGCAACCTGCTGGGCGATGAGCAAAGCGGGCACATCGAAGGCGTCGGTTTCGACCTGTATGTGCGCATGGTGACGAACGCGATCGAGGAATACAAGGAACCCGAGCGCGTGGAACCGGTCGCGGTCACGATCGACCTGCCGGTCGAGGCGTCGATCCCCGTCGACTACATCGATTCCGACAAGCTCAGGCTCGAGGCGTACCGCAAGCTCGCCGAGGCGCGCACCGACGAGGACCTCGACGAGTTGCGCGAAGAGCTCACCGACCGCTATGGCGAGCCTCCGCAGGTGTTCACGTCGCTGTTCGACATTGCGCGTCTGCGGGCCCGCGCCCGTGATTTGGGTATCACGGAGATTGTGGGGCAGGGACGCAAGCTGCGCGTCGGCAAGATTAACCCGCCGGAGTCGGTGCGCATGCGCATCGAACGCATTTACAAAGGT
PROTEIN sequence
Length: 1138
MPADRDTRTPEDELIAGSLGDVREALARDPQFAALAHGEIETPDDATDPSLLIGAPQGIRPALAAATAERAPVVVIVPSGREAEELVEDIRSWYRGDPASVAQLQSWETLPHERLSPRADTVANRMEVFRRLCHPQQGSAMFGPIRILIMPVRSLIQPVVAGIGDVAPLVFTCGGEMPLDTAAQQLVRNAYTRVDLVMDRGEFAVRGGLIDVFPPTAPHPVRIEFFGDEIDSIRQFHASDQRTYGDEIDSIWATPCREVQLTDEIRDRARSLVGSIPNADDMLESIAQGIPVEGMESLIPALIDEMQPVSSMLPRGSVVMLSDPEKLRRAVDDLEKTANEFLATSWSVAASGHGSGAPITFDQANFLNYQEAVAQLMYSEREVWQVSGFTVDTAQPGHVQIAAQTPVDFRGSETKAEQGLHELLDSGYELTLTAAAHGTLQRLKRMLHGIGVTRFACVRSQAQDGFIDTAAKVALLTERDVTGRASAAGASRTPRKRHKSIDLMELKLGDFVVHEQHGVGRFVEMRQRTTGTGRNQSTREYLVIEYAPSKRNAPPDKLFIPTDQLDQVSKYIGAEIPKLNKLGGSDWAQTKAKAKKHVHEIAQNLIKLYAARQQAKGFAFSKDTPWQKELEDAFPYQETADQLTTIDDVKADMEKPIPMDRLICGDVGFGKTEIALRAAFKAVQDAKQVAVLVPTTLLVQQHFETFSERFEGFPVKVAAMSRFQSTKEINETLKGLEDGTVDVVIGTHKLLNPKVKFKDLGLVIIDEEQRFGVEAKETLKAIRTNVDVLSLSATPIPRTLEMAVTGIREMSTLATPPEDRLPVLTYVGAYEDAQVTAAVRRELLRGGQVFYIHNRVQDIDQKAAQLRELVPEARIGIAHGKMGRKQLDQIIRDFWHRDIDVLLCTTIVETGLDISNANTLIVDNAGKFGLSQLHQLRGRVGRGHDRAYAYFLYDPSKPMTEQSHERLVTIAQHTALGSGFDVAMKDLELRGTGNLLGDEQSGHIEGVGFDLYVRMVTNAIEEYKEPERVEPVAVTIDLPVEASIPVDYIDSDKLRLEAYRKLAEARTDEDLDELREELTDRYGEPPQVFTSLFDIARLRARARDLGITEIVGQGRKLRVGKINPPESVRMRIERIYKG