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L2_040_365G1_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 214 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_10_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..4200)
DNA (4200bp) protein (1400aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGL8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04031.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_040_365G1_scaffold_10_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4579..5850
DNA (1272bp) protein (424aa)
gsh; glutamate--cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase {ECO:0000313|EMBL:AFL04030.1}; EC=6.3.2.2 {ECO:0000313|EMBL:AFL04030.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Glutamate--cysteine ligase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGL7_BIFBI
L2_040_365G1_scaffold_10_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5926..6837
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GGU2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23635.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_040_365G1_scaffold_10_4
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6860..11884)
DNA (5025bp) protein (1675aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GDW7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23643.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
CoA-substrate-specific enzyme activase
L2_040_365G1_scaffold_10_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12467..13177)
DNA (711bp) protein (237aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=8 Tax=Bifidobacterium RepID=E3ELY8_BIFBS
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:EKF15716.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
nrdG; anaerobic ribonucleoside-triphosphate reductaseactivating protein
L2_040_365G1_scaffold_10_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13329..15713)
DNA (2385bp) protein (795aa)
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside triphosphate reductase {ECO:0000313|EMBL:EKF15715.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EKF15715.1};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Anaerobic ribonucleoside-triphosphate reductase n=8 Tax=Bifidobacterium RepID=E3ELY7_BIFBS
L2_040_365G1_scaffold_10_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16010..17335
DNA (1326bp) protein (442aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Exodeoxyribonuclease 7 large subunit n=4 Tax=Bifidobacterium RepID=E4P067_BIFBP
L2_040_365G1_scaffold_10_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17447..17746
DNA (300bp) protein (100aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Exodeoxyribonuclease 7 small subunit n=8 Tax=Bifidobacterium RepID=E3ELY5_BIFBS
L2_040_365G1_scaffold_10_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18049..18978)
DNA (930bp) protein (310aa)
endonuclease n=1 Tax=Bifidobacterium bifidum RepID=UPI00036DA02B
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EFR49816.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
endonuclease/exonuclease/phosphatase
L2_040_365G1_scaffold_10_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19968..20129
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=K2M1D8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:CDB23663.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_040_365G1_scaffold_10_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20280..21257)
DNA (978bp) protein (326aa)
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:EFR49813.1}; EC=3.2.2.- {ECO:0000313|EMBL:EFR49813.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Inosine/uridine-preferring nucleoside hydrolase n=3 Tax=Bifidobacterium bifidum RepID=E3ELY3_BIFBS
iunH1; inosine/uridine-preferring nucleoside hydrolase
L2_040_365G1_scaffold_10_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21331..22698)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CC42_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ97647.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
pyridine nucleotide-disulfide oxidoreductase family protein
L2_040_365G1_scaffold_10_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22878..23687)
DNA (810bp) protein (270aa)
Dinucleotide-utilizing enzyme n=4 Tax=Bifidobacterium RepID=E3ELY1_BIFBS
thiF; ThiF protein
Dinucleotide-utilizing enzyme {ECO:0000313|EMBL:ADO52677.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_365G1_scaffold_10_14
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23903..24652
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6HBW3_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB23672.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_040_365G1_scaffold_10_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24705..24947)
DNA (243bp) protein (81aa)
Ppx/GppA phosphatase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M0H9_BIFBI
gppA; exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:CDB23677.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_040_365G1_scaffold_10_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25531..26727)
DNA (1197bp) protein (399aa)
aspC; aspartate amino transferase (EC:2.6.1.1)
Aspartate amino transferase n=5 Tax=Bifidobacterium RepID=I3WGK3_BIFBI
Aminotransferase {ECO:0000313|EMBL:EFR49808.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_040_365G1_scaffold_10_17
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26912..27499)
DNA (588bp) protein (196aa)
DNA mismatch endonuclease vsr n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GR04_9BIFI
DNA mismatch endonuclease vsr {ECO:0000313|EMBL:CDB23681.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
vsr; DNA mismatch endonuclease vsr
L2_040_365G1_scaffold_10_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27587..29008
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P057_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52672.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_365G1_scaffold_10_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29193..29846)
DNA (654bp) protein (218aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Peptide deformylase n=2 Tax=Bifidobacterium bifidum RepID=E4P056_BIFBP
L2_040_365G1_scaffold_10_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29888..31369)
DNA (1482bp) protein (494aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Phosphoglucosamine mutase n=8 Tax=Bifidobacterium RepID=E3ELX4_BIFBS
L2_040_365G1_scaffold_10_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31649..33313)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DQT9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82091.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_040_365G1_scaffold_10_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33853..36465)
DNA (2613bp) protein (871aa)
pepN; membrane alanine aminopeptidase PepN (EC:3.4.11.2)
PepN Membrane alanine aminopeptidase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZX5_BIFBP
Membrane alanine aminopeptidase {ECO:0000313|EMBL:CDB23694.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_040_365G1_scaffold_10_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36632..38473)
DNA (1842bp) protein (614aa)
Metal-dependent hydrolase n=7 Tax=Bifidobacterium bifidum RepID=E4NZX4_BIFBP
ribonuclease J
Metal-dependent hydrolase {ECO:0000313|EMBL:KFI42515.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_040_365G1_scaffold_10_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38647..39537)
DNA (891bp) protein (297aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
4-hydroxy-tetrahydrodipicolinate synthase n=5 Tax=Bifidobacterium RepID=I3WGJ5_BIFBI
L2_040_365G1_scaffold_10_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39701..40453)
DNA (753bp) protein (251aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
4-hydroxy-tetrahydrodipicolinate reductase n=6 Tax=Bifidobacterium RepID=E3ELW8_BIFBS
L2_040_365G1_scaffold_10_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40681..41028
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=U2BV64_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42513.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L2_040_365G1_scaffold_10_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41081..41260
DNA (180bp) protein (60aa)
DNA-damage-inducible protein J n=8 Tax=Bifidobacterium RepID=I3WGJ2_BIFBI
hypothetical protein
DNA-damage-inducible protein J {ECO:0000313|EMBL:EKF16209.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_040_365G1_scaffold_10_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41433..41681
DNA (249bp) protein (83aa)
adenine DNA methyltransferase n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976753
Uncharacterized protein {ECO:0000313|EMBL:KFI42511.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
putative DNA modification methyl transferase
L2_040_365G1_scaffold_10_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41627..42010
DNA (384bp) protein (128aa)
Oligopeptide/dipeptide transporter, C-terminal domain protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V852_BIFBI
Oligopeptide/dipeptide transporter, C-terminal domain protein {ECO:0000313|EMBL:EFR49794.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
ABC transporter
L2_040_365G1_scaffold_10_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41913..43331)
DNA (1419bp) protein (473aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZW8_BIFBP
hypothetical protein
Putative transport protein {ECO:0000313|EMBL:AFL04003.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Displaying items 1-30 of 214 in total

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