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L2_040_365G1_scaffold_198

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_198_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..533)
DNA (531bp) protein (177aa)
Lacto-N-biose phosphorylase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFZ8_BIFBI
lacto-N-biose phosphorylase
Lacto-N-biose phosphorylase 2 {ECO:0000313|EMBL:ADO52461.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_365G1_scaffold_198_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(681..1217)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CIN0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42341.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L2_040_365G1_scaffold_198_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1214..2032)
DNA (819bp) protein (273aa)
Short chain dehydrogenase {ECO:0000313|EMBL:KFI42340.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KFI42340.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Short chain dehydrogenase n=4 Tax=Bifidobacterium bifidum RepID=E4NYY6_BIFBP
3-oxoacyl-ACP reductase
L2_040_365G1_scaffold_198_4
unknown

Not on your lists

2280..2576
DNA (297bp) protein (99aa)

This feature has no annotations

L2_040_365G1_scaffold_198_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2725..2865)
DNA (141bp) protein (47aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELR2_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52457.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_365G1_scaffold_198_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3057..4073
DNA (1017bp) protein (339aa)
HTH-type transcriptional repressor n=4 Tax=Bifidobacterium RepID=I3WFZ3_BIFBI
cytR; HTH-type transcriptional repressor
HTH-type transcriptional repressor {ECO:0000313|EMBL:EKF14756.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_040_365G1_scaffold_198_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4179..4337)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MBU4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF14757.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_040_365G1_scaffold_198_8
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4509..5198
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HAL2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23252.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_040_365G1_scaffold_198_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5297..6283)
DNA (987bp) protein (329aa)
Tetratricopeptide repeat protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DQM6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ97440.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
thioredoxin-like protein
L2_040_365G1_scaffold_198_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6532..7545)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=I3WFY9_BIFBI
hypothetical protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:CDB23254.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_040_365G1_scaffold_198_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7538..8611)
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELQ7_BIFBS
Membrane spanning protein {ECO:0000313|EMBL:KFI42335.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L2_040_365G1_scaffold_198_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8702..9691
DNA (990bp) protein (330aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELQ6_BIFBS
fkbP1; peptidylprolyl isomerase, FKBP-type
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_365G1_scaffold_198_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9946..10638)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=8 Tax=Bifidobacterium RepID=E3ELQ4_BIFBS
rlpA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_365G1_scaffold_198_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10653..11084)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=8 Tax=Bifidobacterium RepID=E3ELQ3_BIFBS
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_040_365G1_scaffold_198_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11408..12349)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HUK4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50142.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_040_365G1_scaffold_198_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12549..13259
DNA (711bp) protein (237aa)
Transcriptional regulator, TetR family n=3 Tax=Bifidobacterium RepID=E3ELQ1_BIFBS
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADO52446.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_365G1_scaffold_198_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13481..14824
DNA (1344bp) protein (448aa)
ABC transporter, permease n=3 Tax=Bifidobacterium bifidum RepID=I3WFY2_BIFBI
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:EKF15190.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_040_365G1_scaffold_198_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14921..16246)
DNA (1326bp) protein (442aa)
murA; UDP-N-acetylglucosamine1-carboxyvinyl transferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=8 Tax=Bifidobacterium RepID=E3ELP9_BIFBS
L2_040_365G1_scaffold_198_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16525..17778)
DNA (1254bp) protein (418aa)
Dihydroorotate oxidase {ECO:0000313|EMBL:EFR49585.1}; EC=1.3.98.1 {ECO:0000313|EMBL:EFR49585.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Dihydroorotate dehydrogenase n=4 Tax=Bifidobacterium RepID=E3ELP8_BIFBS
dihydroorotate dehydrogenase
L2_040_365G1_scaffold_198_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17803..18909)
DNA (1107bp) protein (369aa)
CAAX amino terminal protease family protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CIL4_BIFBI
CAAX amino terminal protease
Uncharacterized protein {ECO:0000313|EMBL:KFI42327.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_040_365G1_scaffold_198_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19038..19211)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7J1_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR49583.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_040_365G1_scaffold_198_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19801..20181)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HCA9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23812.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_040_365G1_scaffold_198_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20256..24275)
DNA (4020bp) protein (1340aa)
Helicase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYW8_BIFBP
helicase
Helicase {ECO:0000313|EMBL:EKE50211.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_040_365G1_scaffold_198_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24434..25126)
DNA (693bp) protein (231aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
LeuD 3-isopropylmalate dehydratase small subunit n=6 Tax=Bifidobacterium RepID=E4NYW7_BIFBP
L2_040_365G1_scaffold_198_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25277..26680)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
3-isopropylmalate dehydratase large subunit n=7 Tax=Bifidobacterium bifidum RepID=E3ELP3_BIFBS
leuC; 3-isopropylmalate dehydratase large subunit
L2_040_365G1_scaffold_198_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26988..27809
DNA (822bp) protein (274aa)
HTH-type transcriptional regulator n=2 Tax=Bifidobacterium bifidum RepID=K2MXI6_BIFBI
Regulatory protein containing IclR domain {ECO:0000313|EMBL:EKE50214.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
regulatory protein containing IclR domain
L2_040_365G1_scaffold_198_27
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27951..29240)
DNA (1290bp) protein (430aa)
Putative phosphohydrolase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFX3_BIFBI
putative phosphohydrolase
Phosphoesterase {ECO:0000313|EMBL:CDB23821.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_040_365G1_scaffold_198_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30203..30595
DNA (393bp) protein (131aa)
ATPase AAA n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H8B9_BIFBI
ATPase AAA {ECO:0000313|EMBL:EKE50216.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
ATPase AAA
L2_040_365G1_scaffold_198_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30567..31091
DNA (525bp) protein (175aa)
ATPase (AAA+ superfamily)-like protein n=3 Tax=Bifidobacterium bifidum RepID=E4NYW2_BIFBP
ATPase AAA
Uncharacterized protein {ECO:0000313|EMBL:ERI83888.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_040_365G1_scaffold_198_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31333..32871)
DNA (1539bp) protein (513aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Glutamate--tRNA ligase n=5 Tax=Bifidobacterium bifidum RepID=E3ELN8_BIFBS
Displaying items 1-30 of 53 in total

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