ggKbase home page

L2_041_000G1_scaffold_4242

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_4242_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

666..1352
DNA (687bp) protein (229aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
Uncharacterized tRNA/rRNA methyltransferase lasT n=113 Tax=Escherichia RepID=E2QLG4_ECOLX
RNA methyltransferase, TrmH family, group 1
L2_041_000G1_scaffold_4242_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1712..2620
DNA (909bp) protein (303aa)
thrA; aspartokinase/homoserine dehydrogenase I (EC:2.7.2.4 1.1.1.3)
ThrA {ECO:0000313|EMBL:EHU45308.1}; EC=2.7.2.4 {ECO:0000313|EMBL:EHU45308.1};; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
Aspartokinase n=1 Tax=Escherichia coli 4_1_47FAA RepID=H1BYT3_ECOLX
L2_041_000G1_scaffold_4242_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2593..4665
DNA (2073bp) protein (691aa)
Bifunctional aspartokinase/homoserine dehydrogenase 1 n=1 Tax=Escherichia coli UMEA 3065-1 RepID=T8PN26_ECOLX
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I
Bifunctional aspartokinase/homoserine dehydrogenase 1 {ECO:0000313|EMBL:KDH01065.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L2_041_000G1_scaffold_4242_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4666..5754
DNA (1089bp) protein (363aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase n=2 Tax=Escherichia coli RepID=M8XBB2_ECOLX
Threonine synthase {ECO:0000313|EMBL:EID69347.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L2_041_000G1_scaffold_4242_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5969..6136
DNA (168bp) protein (56aa)
Uncharacterized protein n=21 Tax=Escherichia coli RepID=L3BED2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQX33653.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_041_000G1_scaffold_4242_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6198..6974)
DNA (777bp) protein (259aa)
UPF0246 protein YaaA n=235 Tax=Escherichia RepID=YAAA_ECO7I
yaaA; hypothetical protein
UPF0246 protein YaaA {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L2_041_000G1_scaffold_4242_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7044..8474)
DNA (1431bp) protein (477aa)
Amino acid carrier protein n=21 Tax=Escherichia coli RepID=L3BGB1_ECOLX
putative transporter YaaJ
Amino acid carrier protein {ECO:0000313|EMBL:ESD34597.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_041_000G1_scaffold_4242_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8753..9706
DNA (954bp) protein (318aa)
transaldolase B (EC:2.2.1.2)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=1268995 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908525.;"
Transaldolase B n=547 Tax=Enterobacteriaceae RepID=TALB_ECOL6
L2_041_000G1_scaffold_4242_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9821..10408
DNA (588bp) protein (196aa)
Molybdopterin biosynthesis mog protein n=521 Tax=Escherichia RepID=E2QE98_ECOLX
mogA; molybdenum cofactor biosynthesis protein
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:EMW13228.1}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L2_041_000G1_scaffold_4242_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10613..11179)
DNA (567bp) protein (189aa)
Inner membrane protein yaaH n=343 Tax=Escherichia RepID=E2QE99_ECOLX
yaaH; hypothetical protein
Inner membrane protein yaaH {ECO:0000313|EMBL:KEJ53290.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L2_041_000G1_scaffold_4242_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11328..12041)
DNA (714bp) protein (238aa)
UPF0174 protein yaaW n=239 Tax=Escherichia RepID=E2QEA0_ECOLX
yaaW; hypothetical protein
Ubiquinol-cytochrome C chaperone family protein {ECO:0000313|EMBL:KEJ53291.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Displaying 11 items

View Taxonomy