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L2_041_000G1_scaffold_39

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Displaying items 1-30 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_39_1
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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152..1645
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6K481_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64881.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Fmu (Sun) domain-containing protein
L2_041_000G1_scaffold_39_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1636..2460
DNA (825bp) protein (275aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG97_9CLOT
pseudouridine synthase
L2_041_000G1_scaffold_39_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2501..3166
DNA (666bp) protein (222aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG97_9CLOT
HAD-superfamily hydrolase
L2_041_000G1_scaffold_39_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3163..5058
DNA (1896bp) protein (632aa)
UPF0313 protein CLOBOL_03961 n=4 Tax=Clostridium bolteae RepID=A8RUB4_9CLOT
UPF0313 protein CLOBOL_03961 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
radical SAM protein
L2_041_000G1_scaffold_39_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5101..5853
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41086.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Short-chain dehydrogenases of various substrate specificities
L2_041_000G1_scaffold_39_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5890..6909
DNA (1020bp) protein (340aa)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWD2_9CLOT
Pseudouridine synthase {ECO:0000313|EMBL:CCY41087.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RluA family pseudouridine synthase
L2_041_000G1_scaffold_39_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7039..8136
DNA (1098bp) protein (366aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41089.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_041_000G1_scaffold_39_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8227..8712)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZA38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43035.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_041_000G1_scaffold_39_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8772..9392)
DNA (621bp) protein (207aa)
Transcriptional regulator TetR family n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZHZ5_9CLOT
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDD43034.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transcriptional regulator
L2_041_000G1_scaffold_39_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9603..10733)
DNA (1131bp) protein (377aa)
Iron-sulfur cluster-binding protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGA1_9CLOT
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:CCY41090.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L2_041_000G1_scaffold_39_11
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10938..11489
DNA (552bp) protein (184aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Holliday junction resolvase RecU n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HLS8_9CLOT
Penicillin-binding protein-related factor A, putative recombinase
L2_041_000G1_scaffold_39_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11586..12851
DNA (1266bp) protein (422aa)
histidyl-tRNA synthetase 2 (EC:6.1.1.21)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGA5_9CLOT
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_041_000G1_scaffold_39_13
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12876..13517
DNA (642bp) protein (214aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HLT2_9CLOT
L2_041_000G1_scaffold_39_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13514..14812
DNA (1299bp) protein (433aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG63_9CLOT
L2_041_000G1_scaffold_39_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14814..15401
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGB1_9CLOT
L2_041_000G1_scaffold_39_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15415..16155
DNA (741bp) protein (247aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILD2_9CLOT
L2_041_000G1_scaffold_39_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16142..17455
DNA (1314bp) protein (438aa)
Phosphoribosyl-ATP diphosphatase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUM6_9FIRM
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
phosphoribosyl-ATP diphosphatase
L2_041_000G1_scaffold_39_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17697..18950
DNA (1254bp) protein (418aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
peptidase T. Metallo peptidase. MEROPS family M20B (EC:3.4.11.4)
Peptidase T n=3 Tax=Clostridium bolteae RepID=N9YZR5_9CLOT
L2_041_000G1_scaffold_39_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18953..19864
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J638_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44392.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hydrolase
L2_041_000G1_scaffold_39_20
Streptococcus gallolyticus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19975..20646)
DNA (672bp) protein (224aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193)
5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Streptococcus gallolyticus (strain ATCC BAA-2069) RepID=F0VX41_STRG2
Riboflavin biosynthesis protein RibD C-terminal domain protein {ECO:0000313|EMBL:EFM29841.1}; TaxID=545774 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus gallolyticus subsp. gallolyticus TX20005.;"
L2_041_000G1_scaffold_39_21
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20669..21637)
DNA (969bp) protein (323aa)
Alpha/beta family hydrolase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R7K8_CLOSW
alpha/beta family hydrolase
Alpha/beta family hydrolase {ECO:0000313|EMBL:ADL03737.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_041_000G1_scaffold_39_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21765..22205
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97417.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
transcriptional regulator, MerR family
L2_041_000G1_scaffold_39_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22213..23142)
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56989.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
lysR; LysR family transcriptional regulator
L2_041_000G1_scaffold_39_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23139..24095)
DNA (957bp) protein (319aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQI3_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCY44395.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transcriptional regulator
L2_041_000G1_scaffold_39_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24267..25517
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56992.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L-alanine-DL-glutamate epimerase-like protein
L2_041_000G1_scaffold_39_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25538..26467
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44394.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
binding-protein-dependent transporters inner membrane component
L2_041_000G1_scaffold_39_27
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26474..27322
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQN7_9CLOT
Lactose transport system permease protein LacG {ECO:0000313|EMBL:KJJ74430.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
binding-protein-dependent transporters inner membrane component
L2_041_000G1_scaffold_39_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27349..28695
DNA (1347bp) protein (449aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZYE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ50622.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
extracellular solute-binding protein
L2_041_000G1_scaffold_39_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28722..30059
DNA (1338bp) protein (446aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56994.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
extracellular solute-binding protein
L2_041_000G1_scaffold_39_30
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30112..31002
DNA (891bp) protein (297aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:KJJ72989.1}; EC=1.1.1.60 {ECO:0000313|EMBL:KJJ72989.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
tartronate semialdehyde reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMB5_9CLOT
Displaying items 1-30 of 171 in total

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