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L2_041_000G1_scaffold_64

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_64_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(211..1890)
DNA (1680bp) protein (560aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EDN76150.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDN76150.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B857_RUMGN
L2_041_000G1_scaffold_64_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2046..2462
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22362.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_041_000G1_scaffold_64_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2534..3103)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22363.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
phosphatidylglycerophosphate synthase
L2_041_000G1_scaffold_64_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3170..3493)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84042.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_64_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3523..5748)
DNA (2226bp) protein (742aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA n=2 Tax=Clostridium RepID=B6FIS4_9CLOT
L2_041_000G1_scaffold_64_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5745..6122)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PV32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22366.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_64_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6188..7360)
DNA (1173bp) protein (391aa)
Transporter gate domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIS6_9CLOT
Transporter gate domain protein {ECO:0000313|EMBL:EEA84045.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_64_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7581..8198
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22368.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Domain of unknown function (DUF1836).
L2_041_000G1_scaffold_64_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8221..9351)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84047.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_64_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9341..9643)
DNA (303bp) protein (101aa)
TrpR family protein YerC/YecD n=2 Tax=Clostridium RepID=B6FIS9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22370.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
TrpR-related protein YerC/YecD
L2_041_000G1_scaffold_64_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9705..10430)
DNA (726bp) protein (242aa)
PHP domain protein n=2 Tax=Clostridium RepID=B6FIT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22371.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Histidinol phosphatase and related hydrolases of the PHP family
L2_041_000G1_scaffold_64_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10521..10721
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84050.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_64_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10805..11848
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22373.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_041_000G1_scaffold_64_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11917..12567)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PND7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22374.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_041_000G1_scaffold_64_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12587..14392)
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22375.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Alcohol acetyltransferase.
L2_041_000G1_scaffold_64_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14396..15313)
DNA (918bp) protein (306aa)
Hydrolase, alpha/beta domain protein n=2 Tax=Clostridium RepID=B6FIU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22376.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
alpha/beta hydrolase
L2_041_000G1_scaffold_64_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15412..16803)
DNA (1392bp) protein (464aa)
Putative permease n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIU3_9CLOT
Putative permease {ECO:0000313|EMBL:EEA84055.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Permeases
L2_041_000G1_scaffold_64_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16963..18585)
DNA (1623bp) protein (541aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDI0_9CLOT
L2_041_000G1_scaffold_64_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18614..18871)
DNA (258bp) protein (86aa)
Phosphocarrier, HPr family n=2 Tax=Clostridium RepID=B6FIU5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22379.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
phosphotransferase system, phosphocarrier protein HPr
L2_041_000G1_scaffold_64_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18938..20647)
DNA (1710bp) protein (570aa)
fruA; PTS system, fructose subfamily, IIA component domain protein (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22380.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_041_000G1_scaffold_64_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20644..20862)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84059.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_041_000G1_scaffold_64_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20875..21795)
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIU8_9CLOT
L2_041_000G1_scaffold_64_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21792..22544)
DNA (753bp) protein (251aa)
Transcriptional regulator, DeoR family n=2 Tax=Clostridium RepID=B6FIU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22383.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_64_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22720..23652)
DNA (933bp) protein (311aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=2 Tax=Clostridium RepID=B6FIV0_9CLOT
L2_041_000G1_scaffold_64_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23667..24101)
DNA (435bp) protein (145aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridium RepID=B6FIV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22385.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
BadM/Rrf2 family transcriptional regulator
L2_041_000G1_scaffold_64_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24158..24586)
DNA (429bp) protein (143aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridium RepID=B6FIV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22386.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Iron-sulfur cluster regulator IscR
L2_041_000G1_scaffold_64_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24752..24952
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=2 Tax=Clostridium RepID=B6FIV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22387.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cspD1; cold-shock protein D1
L2_041_000G1_scaffold_64_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25098..31553)
DNA (6456bp) protein (2152aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIV4_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA84066.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
sialidase-like protein
L2_041_000G1_scaffold_64_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31841..38377)
DNA (6537bp) protein (2179aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIV6_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA84035.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_64_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38418..43145)
DNA (4728bp) protein (1576aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIV8_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA84028.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Displaying items 1-30 of 130 in total

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