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L2_041_000G1_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_112_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..486)
DNA (486bp) protein (162aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS58_9BIFI
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EEG71008.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR03910.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ABC transporter substrate-binding protein
L2_041_000G1_scaffold_112_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(643..1569)
DNA (927bp) protein (309aa)
Tyrosine recombinase XerC n=2 Tax=Bifidobacterium RepID=C0BS59_9BIFI
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
recombinase XerC
L2_041_000G1_scaffold_112_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1748..2005
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS60_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71010.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_041_000G1_scaffold_112_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2010..3050)
DNA (1041bp) protein (347aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EEG71011.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EEG71011.1};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Prephenate dehydrogenase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS61_9BIFI
prephenate dehydrogenase
L2_041_000G1_scaffold_112_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3044..4024)
DNA (981bp) protein (327aa)
Prephenate dehydratase {ECO:0000313|EMBL:EEG71012.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EEG71012.1};; Putative chorismate mutase {ECO:0000313|EMBL:BAR03914.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Prephenate dehydratase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS62_9BIFI
chorismate mutase
L2_041_000G1_scaffold_112_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4092..4655)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BS63_9BIFI
Putative alcohol dehydrogenase {ECO:0000313|EMBL:BAR03915.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
alcohol dehydrogenase
L2_041_000G1_scaffold_112_7
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4866..6797)
DNA (1932bp) protein (644aa)
GTP-binding protein TypA n=2 Tax=Bifidobacterium RepID=C0BS64_9BIFI
GTP-binding protein TypA {ECO:0000313|EMBL:AIZ14870.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
GTP-binding protein TypA
L2_041_000G1_scaffold_112_8
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7015..8373)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NS85_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15013.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
putative sugar transporter
L2_041_000G1_scaffold_112_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8464..9261)
DNA (798bp) protein (266aa)
Hydrolase, NUDIX family n=2 Tax=Bifidobacterium RepID=C0BS66_9BIFI
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KEF28194.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ADP-ribose pyrophosphatase
L2_041_000G1_scaffold_112_10
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9428..10267)
DNA (840bp) protein (280aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Bifidobacterium RepID=C0BS67_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15015.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_041_000G1_scaffold_112_11
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10355..11308)
DNA (954bp) protein (318aa)
Tyrosine recombinase XerD n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P933_9BIFI
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
recombinase XerC
L2_041_000G1_scaffold_112_12
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11461..11844)
DNA (384bp) protein (128aa)
50S ribosomal protein L20 n=3 Tax=Bifidobacterium RepID=B6XTB7_9BIFI
50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_041_000G1_scaffold_112_13
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11895..12089)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=3 Tax=Bifidobacterium RepID=B6XTB6_9BIFI
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L2_041_000G1_scaffold_112_14
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12108..12806)
DNA (699bp) protein (233aa)
Translation initiation factor IF-3 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTB5_9BIFI
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
translation initiation factor IF-3
L2_041_000G1_scaffold_112_15
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13119..13868
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NV06_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15020.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
thiamine pyrophosphokinase
L2_041_000G1_scaffold_112_16
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14075..15130
DNA (1056bp) protein (352aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P936_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15021.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L2_041_000G1_scaffold_112_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15245..15751
DNA (507bp) protein (169aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PZB8_9BIFI
prolyl-tRNA synthetase
L2_041_000G1_scaffold_112_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15772..16785)
DNA (1014bp) protein (338aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P2V9_9BIFI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
L2_041_000G1_scaffold_112_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16947..17897
DNA (951bp) protein (317aa)
Aldose 1-epimerase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTB0_9BIFI
Aldose epimerase {ECO:0000313|EMBL:KEF28184.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
aldose epimerase
L2_041_000G1_scaffold_112_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18239..18487)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS78_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71028.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_041_000G1_scaffold_112_21
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18484..19131)
DNA (648bp) protein (216aa)
Sigma-70 region 2 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTA7_9BIFI
Sigma-70 region 2 {ECO:0000313|EMBL:EEB21513.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
RNA polymerase sigma factor RpoE
L2_041_000G1_scaffold_112_22
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19185..20738
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P2W3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15029.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
L2_041_000G1_scaffold_112_23
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20800..21798
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P941_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15031.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
peptidoglycan bridge formation protein FemAB
L2_041_000G1_scaffold_112_24
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21955..23574)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PZC5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15032.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
dihydrofolate synthase
L2_041_000G1_scaffold_112_25
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23721..25322
DNA (1602bp) protein (534aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29526.1}; Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KFI67299.1}; EC=3.4.11.9 {ECO:0000313|EMBL:KFI67299.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NSA5_9BIFI
Xaa-Pro aminopeptidase
L2_041_000G1_scaffold_112_26
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25324..25845
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P2W8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15034.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ADP-ribose pyrophosphatase
L2_041_000G1_scaffold_112_27
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25951..27660)
DNA (1710bp) protein (570aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI67301.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KFI67301.1};; Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29528.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NV18_9BIFI
peptide ABC transporter ATPase
L2_041_000G1_scaffold_112_28
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27665..28837)
DNA (1173bp) protein (391aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BS88_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29529.1}; Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI67302.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
peptide ABC transporter permease
L2_041_000G1_scaffold_112_29
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28839..29930)
DNA (1092bp) protein (364aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BS89_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29530.1}; Peptide ABC transporter permease {ECO:0000313|EMBL:KFI67303.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
peptide ABC transporter permease
L2_041_000G1_scaffold_112_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30100..31731)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P2X5_9BIFI
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEF28173.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
peptide ABC transporter substrate-binding protein
Displaying items 1-30 of 93 in total

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