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L2_041_000G1_scaffold_167

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_167_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..275
DNA (273bp) protein (91aa)
Flavoprotein family protein n=2 Tax=Clostridium RepID=B6FS02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23173.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
NAD(FAD)-utilizing dehydrogenase
L2_041_000G1_scaffold_167_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

292..948
DNA (657bp) protein (219aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=2 Tax=Clostridium RepID=B6FS01_9CLOT
L2_041_000G1_scaffold_167_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

957..1445
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PXI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23171.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_167_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1435..2289
DNA (855bp) protein (285aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Clostridium RepID=B6FRZ8_9CLOT
L2_041_000G1_scaffold_167_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2270..3355
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PQX5_9CLOT
Putative ribosomal protein S1 {ECO:0000313|EMBL:EEA81209.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Ribosomal protein S1
L2_041_000G1_scaffold_167_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3465..4784
DNA (1320bp) protein (440aa)
Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRZ6_9CLOT
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
electron transport complex, RnfABCDGE type, C subunit
L2_041_000G1_scaffold_167_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4812..5741
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6QMH4_9CLOT
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
electron transport complex, RnfABCDGE type, C subunit/electron transport complex, RnfABCDGE type, D subunit
L2_041_000G1_scaffold_167_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5741..6349
DNA (609bp) protein (203aa)
Electron transport complex, RnfABCDGE type, G subunit n=2 Tax=Clostridium RepID=B6FRZ4_9CLOT
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
electron transport complex, RnfABCDGE type, G subunit
L2_041_000G1_scaffold_167_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6342..7040
DNA (699bp) protein (233aa)
Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Clostridium RepID=B6FRZ3_9CLOT
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
electron transport complex, RnfABCDGE type, E subunit
L2_041_000G1_scaffold_167_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7055..7630
DNA (576bp) protein (192aa)
Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Clostridium RepID=B6FRZ2_9CLOT
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
RnfABCDGE type electron transport complex subunit A
L2_041_000G1_scaffold_167_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7644..8435
DNA (792bp) protein (264aa)
Electron transport complex, RnfABCDGE type, B subunit n=2 Tax=Clostridium RepID=B6FRZ1_9CLOT
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:EEA81203.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ferredoxin
L2_041_000G1_scaffold_167_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8482..8940
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QMG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23162.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_167_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9003..9452
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81201.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_167_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9575..9943
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81200.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_167_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9954..10445
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PQW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23159.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_167_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10456..11067
DNA (612bp) protein (204aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Holliday junction ATP-dependent DNA helicase RuvA n=2 Tax=Clostridium RepID=B6FRY6_9CLOT
Holliday junction DNA helicase subunit RuvA
L2_041_000G1_scaffold_167_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11086..12087
DNA (1002bp) protein (334aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Clostridium RepID=B6FRY5_9CLOT
Holliday junction DNA helicase, RuvB subunit
L2_041_000G1_scaffold_167_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12156..12566
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRY4_9CLOT
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cell division protein ZapA
L2_041_000G1_scaffold_167_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12607..14979
DNA (2373bp) protein (791aa)
Collagenase and related proteases (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23155.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_041_000G1_scaffold_167_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14988..16523
DNA (1536bp) protein (512aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PQW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23154.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Bacterial cell division membrane protein
L2_041_000G1_scaffold_167_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16540..17895
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23153.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Cell division protein FtsI/penicillin-binding protein 2
L2_041_000G1_scaffold_167_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17913..18251
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23152.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_167_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18260..19156
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23151.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Protein of unknown function (DUF2953).
L2_041_000G1_scaffold_167_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19179..19565
DNA (387bp) protein (129aa)
Sporulation protein YtfJ n=2 Tax=Clostridium RepID=B6FRX8_9CLOT
Sporulation protein YtfJ {ECO:0000313|EMBL:EEA81190.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_167_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19620..19757
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PQV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23149.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_167_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19814..20002)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=2 Tax=Clostridium RepID=B6FRX6_9CLOT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
LSU ribosomal protein L28P
L2_041_000G1_scaffold_167_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20210..20569
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81187.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_167_28
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20588..22246
DNA (1659bp) protein (553aa)
DAK2 domain fusion protein YloV n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B9S8_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EGG84200.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DegV protein
L2_041_000G1_scaffold_167_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22306..24366
DNA (2061bp) protein (687aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EEA81218.1}; EC=3.6.1.- {ECO:0000313|EMBL:EEA81218.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRX2_9CLOT
L2_041_000G1_scaffold_167_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24495..24701
DNA (207bp) protein (69aa)
Small, acid-soluble spore protein, alpha/beta type n=2 Tax=Clostridium RepID=B6FRX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23144.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Small, acid-soluble spore proteins, alpha/beta type.
Displaying items 1-30 of 91 in total

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