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L2_041_000G1_scaffold_180

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_180_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..123
DNA (123bp) protein (41aa)
IS1272, transposase n=1 Tax=Staphylococcus epidermidis VCU118 RepID=H3V6U2_STAEP
putative transposase for
IS1272-like transposase, degenerate {ECO:0000313|EMBL:AAW53946.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_180_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(319..1572)
DNA (1254bp) protein (418aa)
Acetate kinase (EC:2.7.2.1)
Acetate kinase {ECO:0000255|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000255|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000255|HAMAP-Rule:MF_00020}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Acetate kinase n=48 Tax=Staphylococcus epidermidis RepID=ACKA_STAEQ
L2_041_000G1_scaffold_180_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1661..2608)
DNA (948bp) protein (316aa)
Uncharacterized protein n=35 Tax=Staphylococcus epidermidis RepID=Q8CS59_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59945.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_180_4

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comp(2737..3231)
DNA (495bp) protein (165aa)
Probable thiol peroxidase n=50 Tax=Staphylococcus epidermidis RepID=TPX_STAEQ
tpx; thiol peroxidase
Putative thiol peroxidase {ECO:0000313|EMBL:ETJ19431.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_180_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3473..4237)
DNA (765bp) protein (255aa)
Uncharacterized protein n=46 Tax=Staphylococcus epidermidis RepID=Q5HNJ1_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59943.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_180_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4277..5500)
DNA (1224bp) protein (408aa)
Probable tRNA sulfurtransferase {ECO:0000255|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000255|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000255|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000255|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000255|HAMAP-Rule:MF_00021}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Probable tRNA sulfurtransferase n=47 Tax=Staphylococcus epidermidis RepID=THII_STAEQ
thiI; thiamine biosynthesis protein ThiI
L2_041_000G1_scaffold_180_7

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comp(5500..6639)
DNA (1140bp) protein (380aa)
Aminotransferase, class V n=43 Tax=Staphylococcus epidermidis RepID=Q5HNI9_STAEQ
beta-eliminating lyase family protein
Iron-sulfur cofactor synthesis protein nifZ {ECO:0000313|EMBL:ETJ19435.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_180_8

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comp(6969..8663)
DNA (1695bp) protein (565aa)
Septation ring formation regulator EzrA n=29 Tax=Staphylococcus epidermidis RepID=EZRA_STAES
Septation ring formation regulator EzrA {ECO:0000313|EMBL:ETJ19436.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
septation ring formation regulator EzrA
L2_041_000G1_scaffold_180_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8798..9268
DNA (471bp) protein (157aa)
GAF domain protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HNI7_STAEQ
GAF domain protein; CDS_ID OB2202
GAF domain protein {ECO:0000313|EMBL:AAW54685.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_180_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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9489..10091
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=62 Tax=Staphylococcus epidermidis RepID=RS4_STAEQ
SSU ribosomal protein S4p (S9e)
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_180_11

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comp(10361..11107)
DNA (747bp) protein (249aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase, putative n=50 Tax=Staphylococcus epidermidis RepID=Q5HNI4_STAEQ
Putative glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:ETJ19439.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_180_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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11185..11625
DNA (441bp) protein (147aa)
OsmC/Ohr family protein n=54 Tax=Staphylococcus epidermidis RepID=Q5HNI3_STAEQ
hypothetical protein
Peroxiredoxin, SACOL1771 subfamily {ECO:0000313|EMBL:EFE59936.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_180_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11752..12915
DNA (1164bp) protein (388aa)
Phosphoserine aminotransferase, putative (EC:2.6.1.52)
Aminotransferase, class V n=49 Tax=Staphylococcus epidermidis RepID=Q5HNI2_STAEQ
Aminotransferase, class V {ECO:0000313|EMBL:AAW54690.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_180_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12905..14500
DNA (1596bp) protein (532aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AAW54691.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AAW54691.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
D-3-phosphoglycerate dehydrogenase n=39 Tax=Staphylococcus epidermidis RepID=Q5HNI1_STAEQ
L2_041_000G1_scaffold_180_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14580..15704)
DNA (1125bp) protein (375aa)
Phosphoserine phosphatase, putative (EC:3.1.3.3)
Hydrolase, haloacid dehalogenase-like family n=45 Tax=Staphylococcus epidermidis RepID=Q5HNI0_STAEQ
Hydrolase, haloacid dehalogenase-like family {ECO:0000313|EMBL:AAW54697.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_180_16
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(15800..17272)
DNA (1473bp) protein (491aa)
PTS system, N-acetylglucosamine-specific IIBC component n=12 Tax=Staphylococcus epidermidis RepID=C5Q9X2_STAEP
PTS system N-acetylglucosamine-specific transporter subunit IIBC
PTS family porter {ECO:0000313|EMBL:ETJ14037.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_041_000G1_scaffold_180_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17482..18105)
DNA (624bp) protein (208aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase, putative n=48 Tax=Staphylococcus epidermidis RepID=Q5HNH8_STAEQ
Acyltransferase {ECO:0000313|EMBL:EFE59931.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_180_18
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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18385..19623
DNA (1239bp) protein (413aa)
Serine proteinase Do n=23 Tax=Staphylococcus epidermidis RepID=Q8CNW1_STAES
PDZ domain protein
S1 family peptidase {ECO:0000313|EMBL:ETJ14035.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_041_000G1_scaffold_180_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(19814..21079)
DNA (1266bp) protein (422aa)
Tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02006}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02006};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02006}; Short=TyrRS {ECO:0000255|HAMAP-Rule:MF_02006};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Tyrosine--tRNA ligase n=53 Tax=Staphylococcus epidermidis RepID=SYY_STAEQ
L2_041_000G1_scaffold_180_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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21483..22388
DNA (906bp) protein (302aa)
Multimodular transpeptidase-transglycosylase (EC:2.4.1.129)
Transglycosylase domain protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HNH5_STAEQ
Transglycosylase {ECO:0000313|EMBL:EFE59928.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_180_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22478..24145)
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Formate--tetrahydrofolate ligase n=44 Tax=Staphylococcus epidermidis RepID=FTHS_STAEQ
L2_041_000G1_scaffold_180_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(24565..25554)
DNA (990bp) protein (330aa)
Catabolite control protein A n=49 Tax=Staphylococcus epidermidis RepID=CCPA_STAEQ
Catabolite control protein A
Catabolite control protein A {ECO:0000313|EMBL:EFE59926.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_180_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25810..26901)
DNA (1092bp) protein (364aa)
Chorismate mutase/phospho-2-dehydro-3-deoxyheptonate aldolase n=62 Tax=Staphylococcus epidermidis RepID=Q5HNH2_STAEQ
bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase
Chorismate mutase/phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:AAW54710.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_180_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27336..28616)
DNA (1281bp) protein (427aa)
Smooth muscle caldesmon n=37 Tax=Staphylococcus epidermidis RepID=Q8CNV6_STAES
smooth muscle caldesmon
Uncharacterized protein {ECO:0000313|EMBL:EFE59924.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_180_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28637..29128)
DNA (492bp) protein (164aa)
UPF0478 protein SERP1299 n=81 Tax=Staphylococcus epidermidis RepID=Y1299_STAEQ
General stress protein-like protein
Uncharacterized protein {ECO:0000313|EMBL:ESV19858.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_041_000G1_scaffold_180_26

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comp(29203..30516)
DNA (1314bp) protein (438aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=15 Tax=Staphylococcus epidermidis RepID=D1WMP8_STAEP
UDP-N-acetylmuramate-L-alanine ligase {ECO:0000313|EMBL:ETJ20241.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_180_27

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comp(30537..34046)
DNA (3510bp) protein (1170aa)
FtsK/SpoIIIE family protein n=18 Tax=Staphylococcus epidermidis RepID=C5Q9Y1_STAEP
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:ETJ20240.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ftsK/SpoIIIE family protein
L2_041_000G1_scaffold_180_28

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comp(34067..34663)
DNA (597bp) protein (199aa)
Uncharacterized protein n=53 Tax=Staphylococcus epidermidis RepID=Q5HNG7_STAEQ
tRNA binding domain protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ20239.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_180_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34686..35540)
DNA (855bp) protein (285aa)
UPF0354 protein SERP1303 n=45 Tax=Staphylococcus epidermidis RepID=Y1303_STAEQ
Uncharacterized SAV1743 homolog
UPF0354 protein HMPREF0794_0277 {ECO:0000256|HAMAP-Rule:MF_01548}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_180_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(35678..35989)
DNA (312bp) protein (104aa)
Thioredoxin, putative n=52 Tax=Staphylococcus epidermidis RepID=Q5HNG5_STAEQ
Thioredoxin CDS_ID OB2235
Thioredoxin {ECO:0000313|EMBL:EFE59918.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 63 in total

View Taxonomy