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L2_041_000G1_scaffold_184

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_184_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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521..2080
DNA (1560bp) protein (520aa)
rprX; two-component regulatory system, sensor kinase protein (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Sensor protein RprX n=14 Tax=Bacteroides RepID=RPRX_BACFR
L2_041_000G1_scaffold_184_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2082..2783
DNA (702bp) protein (234aa)
Transcriptional regulatory protein RprY n=14 Tax=Bacteroides RepID=RPRY_BACFR
rprY; two-component system, transcriptional regulatory protein
Transcriptional regulatory family protein {ECO:0000313|EMBL:EXZ04083.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
L2_041_000G1_scaffold_184_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2860..3036)
DNA (177bp) protein (59aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C6IAS9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKA83791.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
hypothetical protein
L2_041_000G1_scaffold_184_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3178..3624)
DNA (447bp) protein (149aa)
MarR family transcriptional regulator n=14 Tax=Bacteroides RepID=Q64PH6_BACFR
putative MarR-family regulatory protein
MarR family protein {ECO:0000313|EMBL:EXY64159.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
L2_041_000G1_scaffold_184_5
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3786..4130
DNA (345bp) protein (115aa)
30S ribosomal protein S6 n=17 Tax=Bacteroides RepID=RS6_BACFN
rpsF; putative 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
L2_041_000G1_scaffold_184_6
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


4133..4405
DNA (273bp) protein (91aa)
30S ribosomal protein S18 n=14 Tax=Bacteroides RepID=RS18_BACFN
rpsR; putative 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L2_041_000G1_scaffold_184_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


4417..4860
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=12 Tax=Bacteroides RepID=RL9_BACFN
rplI; putative 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_041_000G1_scaffold_184_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5183..5401)
DNA (219bp) protein (73aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=Q64PI1_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA80222.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
L2_041_000G1_scaffold_184_9
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5560..7233)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=C6IAS2_9BACE
putative long-chain-fatty-acid--CoA ligase
AMP-binding enzyme {ECO:0000313|EMBL:EEZ24824.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L2_041_000G1_scaffold_184_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7662..8981
DNA (1320bp) protein (440aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=E1WWX5_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW24151.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L2_041_000G1_scaffold_184_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8984..9880
DNA (897bp) protein (299aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=C6IAS0_9BACE
putative lipd A biosynthesis related exported protein
Bacterial lipid A biosynthesis acyltransferase family protein {ECO:0000313|EMBL:EXZ52277.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L2_041_000G1_scaffold_184_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9873..10904
DNA (1032bp) protein (344aa)
Glycosyltransferase, group 2 family protein n=3 Tax=Bacteroides RepID=D1JUZ6_9BACE
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EXZ93256.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
glycosyltransferase
L2_041_000G1_scaffold_184_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10909..11427
DNA (519bp) protein (173aa)
mgsA; putative methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
Methylglyoxal synthase n=14 Tax=Bacteroides RepID=E1WWX2_BACF6
L2_041_000G1_scaffold_184_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11696..11884
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HMZ6_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY93053.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_041_000G1_scaffold_184_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11992..13413)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6IAR7_9BACE
AhpC/TSA family protein {ECO:0000313|EMBL:EXZ81679.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
hypothetical protein
L2_041_000G1_scaffold_184_16
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13437..13805)
DNA (369bp) protein (123aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:EEZ24818.1}; EC=4.1.2.25 {ECO:0000313|EMBL:EEZ24818.1};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Dihydroneopterin aldolase n=8 Tax=Bacteroides RepID=D1JUZ3_9BACE
putative dihydroneopterin aldolase
L2_041_000G1_scaffold_184_17
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13856..14887)
DNA (1032bp) protein (344aa)
O-acetyl transferase n=8 Tax=Bacteroides RepID=Q64PL0_BACFR
putative acetyltransferase membrane protein
Putative acetyltransferase membrane protein {ECO:0000313|EMBL:CDD42578.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_041_000G1_scaffold_184_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15017..17719)
DNA (2703bp) protein (901aa)
4-alpha-glucanotransferase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PL1_BACFR
4-alpha-glucanotransferase
4-alpha-glucanotransferase {ECO:0000313|EMBL:BAD50570.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_041_000G1_scaffold_184_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17917..20538)
DNA (2622bp) protein (874aa)
Ribonucleoside-diphosphate reductase n=6 Tax=Bacteroides RepID=C6IAR3_9BACE
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EKA83754.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
putative ribonucleoside reductase
L2_041_000G1_scaffold_184_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20709..21488
DNA (780bp) protein (260aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I3HMZ0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY93047.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative oxidase
L2_041_000G1_scaffold_184_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21576..23006)
DNA (1431bp) protein (477aa)
Chromosomal replication initiator protein DnaA n=11 Tax=Bacteroides RepID=DNAA_BACFN
dnaA; putative chromosomal replication initiator protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_041_000G1_scaffold_184_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23355..24248)
DNA (894bp) protein (298aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=Q64PL5_BACFR
hypothetical protein
Mce related family protein {ECO:0000313|EMBL:EXZ77008.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_041_000G1_scaffold_184_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24268..25512)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C6IAQ9_9BACE
putative exported N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:EYE42312.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_041_000G1_scaffold_184_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25620..26537
DNA (918bp) protein (306aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C6IAQ8_9BACE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAH09295.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L2_041_000G1_scaffold_184_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26555..27010
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6IAQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY43243.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
putative acetyltransferase
L2_041_000G1_scaffold_184_26
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27357..29591)
DNA (2235bp) protein (745aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I3HMY4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EGN05965.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
glycoside hydrolase 3
L2_041_000G1_scaffold_184_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29629..31803)
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FWL1_BACFG
Aspartyl protease family protein {ECO:0000313|EMBL:EXZ81658.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
hypothetical protein
L2_041_000G1_scaffold_184_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31941..34247)
DNA (2307bp) protein (769aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FRL4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA83745.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
putative glycosyl hydrolase lipoprotein
L2_041_000G1_scaffold_184_29
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34684..35220
DNA (537bp) protein (179aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WWV9_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD42565.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_041_000G1_scaffold_184_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35312..38050
DNA (2739bp) protein (913aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6IAQ2_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY90776.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
Displaying items 1-30 of 58 in total

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