ggKbase home page

L2_041_000G1_scaffold_186

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_186_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..281
DNA (279bp) protein (93aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6L9F7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU51174.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_041_000G1_scaffold_186_2
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

286..954
DNA (669bp) protein (223aa)
Pyridoxal phosphate enzyme, YggS family n=2 Tax=Bacteroidales RepID=D0TAN8_9BACE
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EKN27074.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_041_000G1_scaffold_186_3
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

984..1961
DNA (978bp) protein (326aa)
dihydroorotate dehydrogenase 2 (EC:1.3.98.1)
Dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:EFK61353.1}; EC=1.3.98.1 {ECO:0000313|EMBL:EFK61353.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Dihydroorotate dehydrogenase family protein n=9 Tax=Bacteroidales RepID=A6L9F5_PARD8
L2_041_000G1_scaffold_186_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2171..2536
DNA (366bp) protein (122aa)
Transcriptional regulator, MarR family n=9 Tax=Bacteroidales RepID=C7XA94_9PORP
transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEU51171.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_041_000G1_scaffold_186_5
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2604..5072
DNA (2469bp) protein (823aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ATF6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27071.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
pyridine nucleotide-disulfide oxidoreductase
L2_041_000G1_scaffold_186_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5177..5713)
DNA (537bp) protein (179aa)
Acetyltransferase, GNAT family n=1 Tax=Parabacteroides sp. D13 RepID=C7XA92_9PORP
Acetyltransferase, GNAT family {ECO:0000313|EMBL:KDS48280.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
N-acetyltransferase GCN5
L2_041_000G1_scaffold_186_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5723..5881)
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7XA91_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS48304.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L2_041_000G1_scaffold_186_8
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6020..7294)
DNA (1275bp) protein (425aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine-tRNA ligase n=1 Tax=Parabacteroides sp. D25 RepID=K6BG73_9PORP
Serine-tRNA ligase {ECO:0000313|EMBL:EKN27068.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_041_000G1_scaffold_186_9
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7342..7881)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZJJ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27067.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
lipoprotein
L2_041_000G1_scaffold_186_10
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8011..8721)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ATF0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27066.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
two-component system response regulator
L2_041_000G1_scaffold_186_11
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8718..9740)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ATZ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27065.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
two-component system sensor histidine kinase
L2_041_000G1_scaffold_186_12
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9840..11834)
DNA (1995bp) protein (665aa)
Alpha-glucosidase n=2 Tax=Bacteroidales RepID=D7IWH8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN27064.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycoside hydrolase
L2_041_000G1_scaffold_186_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11917..13656
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BG68_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27063.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
acetylhydrolase
L2_041_000G1_scaffold_186_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13669..14205)
DNA (537bp) protein (179aa)
Competence-damage inducible protein n=6 Tax=Bacteroidales RepID=A6L9E5_PARD8
competence-damage inducible protein
Competence-damage inducible protein {ECO:0000313|EMBL:ABR42309.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_041_000G1_scaffold_186_15
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14270..15289)
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=3 Tax=Bacteroidales RepID=A6L9E4_PARD8
DNA-binding/iron metalloprotein/AP endonuclease
L2_041_000G1_scaffold_186_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15429..19892
DNA (4464bp) protein (1488aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XA82_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51159.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L2_041_000G1_scaffold_186_17
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19849..20781)
DNA (933bp) protein (311aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
tRNA-dihydrouridine synthase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAM5_9BACE
dihydrouridine synthase
L2_041_000G1_scaffold_186_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20783..21448)
DNA (666bp) protein (222aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Octanoyltransferase n=6 Tax=Bacteroidales RepID=LIPB_PARD8
lipoate-protein ligase B
L2_041_000G1_scaffold_186_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21394..22194)
DNA (801bp) protein (267aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=3 Tax=Parabacteroides RepID=C7XA79_9PORP
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
L2_041_000G1_scaffold_186_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22335..23993
DNA (1659bp) protein (553aa)
AMP-binding enzyme n=9 Tax=Bacteroidales RepID=C7XA78_9PORP
AMP-binding enzyme family protein {ECO:0000313|EMBL:EFI07287.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
long-chain-fatty-acid--CoA ligase
L2_041_000G1_scaffold_186_21
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24044..24553)
DNA (510bp) protein (170aa)
RNA polymerase ECF-type sigma factor n=8 Tax=Bacteroidales RepID=A6L9D8_PARD8
RNA polymerase ECF-type sigma factor
Sigma-70 region 2 {ECO:0000313|EMBL:EFK61369.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_041_000G1_scaffold_186_22
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24818..26197
DNA (1380bp) protein (460aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6L9D7_PARD8
membrane-bound serine protease
Serine protease, ClpP class {ECO:0000313|EMBL:EFI07285.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_041_000G1_scaffold_186_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26204..26839)
DNA (636bp) protein (212aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6L9D6_PARD8
hypothetical protein
Divergent AAA domain protein {ECO:0000313|EMBL:KDS65452.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_041_000G1_scaffold_186_24
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26910..29180
DNA (2271bp) protein (757aa)
Sodium/hydrogen exchanger family protein n=2 Tax=Bacteroidales RepID=D7IWG6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN27052.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Na+/H+ antiporter
L2_041_000G1_scaffold_186_25
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29195..29950
DNA (756bp) protein (252aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=4 Tax=Parabacteroides RepID=C7XA73_9PORP
L2_041_000G1_scaffold_186_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29967..31691)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ATX6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27050.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_041_000G1_scaffold_186_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31940..33841)
DNA (1902bp) protein (634aa)
Membrane protein insertase YidC n=2 Tax=Parabacteroides distasonis RepID=YIDC_PARD8
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
inner membrane protein translocase component YidC
L2_041_000G1_scaffold_186_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33852..35459)
DNA (1608bp) protein (536aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=6 Tax=Bacteroidales RepID=C7XA70_9PORP
L2_041_000G1_scaffold_186_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35880..37421
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWG1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07278.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L2_041_000G1_scaffold_186_30
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37523..37939
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWG0_9BACE
Sigma-E factor negative regulatory protein RseC {ECO:0000313|EMBL:KEJ86008.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
Displaying items 1-30 of 56 in total

View Taxonomy