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L2_041_000G1_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_204_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..400
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI00030FEA89
SH3 domain protein {ECO:0000313|EMBL:EDQ95398.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
NLP/P60 family protein
L2_041_000G1_scaffold_204_2
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(676..3084)
DNA (2409bp) protein (803aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MI41_9FIRM
L2_041_000G1_scaffold_204_3
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3364..3816
DNA (453bp) protein (151aa)
Cell division protein ZapA n=1 Tax=Clostridium sp. CAG:678 RepID=R5KP75_9CLOT
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L2_041_000G1_scaffold_204_4
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3828..5894
DNA (2067bp) protein (689aa)
Peptidase U32 family n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YV44_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CDA20482.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
hypothetical protein
L2_041_000G1_scaffold_204_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6036..6473
DNA (438bp) protein (146aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Clostridium RepID=R6P5F5_9CLOT
L2_041_000G1_scaffold_204_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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6574..7158
DNA (585bp) protein (195aa)
Maf-like protein HMPREF0866_01450 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XED0_9FIRM
Maf-like protein HMPREF0866_01450 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
maf protein
L2_041_000G1_scaffold_204_7
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7352..8368
DNA (1017bp) protein (339aa)
Cell shape determining protein MreB/Mrl family n=4 Tax=root RepID=R5MPR5_9FIRM
Cell shape determining protein MreB/Mrl family {ECO:0000313|EMBL:CCY91679.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
mreB; Rod shape-determining protein MreB
L2_041_000G1_scaffold_204_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8416..9297
DNA (882bp) protein (294aa)
Cell shape-determining protein MreC n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I796_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
rod shape-determining protein MreC
L2_041_000G1_scaffold_204_9
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9344..9895
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91683.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
putative membrane protein
L2_041_000G1_scaffold_204_10
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10072..12144
DNA (2073bp) protein (691aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PK19_9CLOT
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDC10097.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L2_041_000G1_scaffold_204_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12170..12904
DNA (735bp) protein (245aa)
Site-determining protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IWL1_9FIRM
Site-determining protein {ECO:0000313|EMBL:CDB42372.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
minD; septum site-determining protein MinD
L2_041_000G1_scaffold_204_12
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12976..13380
DNA (405bp) protein (135aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8H3_9FIRM
L2_041_000G1_scaffold_204_13
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13483..14757)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MNC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91184.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L2_041_000G1_scaffold_204_14
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14831..15424)
DNA (594bp) protein (198aa)
Rnf-Nqr subunit membrane protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HZX6_9FIRM
Rnf-Nqr subunit membrane protein {ECO:0000313|EMBL:CDB42590.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
rnfA; rnfA/nqrE
L2_041_000G1_scaffold_204_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15421..16605)
DNA (1185bp) protein (395aa)
Na(+)-translocating NADH-quinone reductase subunit D domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N0T8_9FIRM
Na(+)-translocating NADH-quinone reductase subunit D domain protein {ECO:0000313|EMBL:CCY91196.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
RnfABCDGE type electron transport complex subunit E
L2_041_000G1_scaffold_204_16
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16598..17617)
DNA (1020bp) protein (340aa)
NQR2 and RnfD family protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N1W5_9FIRM
NQR2 and RnfD family protein {ECO:0000313|EMBL:CCY91197.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
rnfD; electron transport complex protein RnfD
L2_041_000G1_scaffold_204_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17752..18324
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HXJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42593.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L2_041_000G1_scaffold_204_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18325..18990)
DNA (666bp) protein (222aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NWD4_9CLOT
L2_041_000G1_scaffold_204_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19361..20410)
DNA (1050bp) protein (350aa)
TPR repeat family protein n=1 Tax=Clostridium difficile P50 RepID=T4R9P1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF27312.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L2_041_000G1_scaffold_204_20
unknown

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comp(20427..20936)
DNA (510bp) protein (170aa)

This feature has no annotations

L2_041_000G1_scaffold_204_21
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21132..23411)
DNA (2280bp) protein (760aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88133.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
glycoside hydrolase family protein
L2_041_000G1_scaffold_204_22
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23682..23930)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HUR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41618.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L2_041_000G1_scaffold_204_23
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24482..25939
DNA (1458bp) protein (486aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium sp. MSTE9 RepID=J0WXA5_9CLOT
putative nicotinate phosphoribosyltransferase
L2_041_000G1_scaffold_204_24
unknown

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comp(26083..26259)
DNA (177bp) protein (59aa)

This feature has no annotations

L2_041_000G1_scaffold_204_25
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(26333..28228)
DNA (1896bp) protein (632aa)
ABC transporter ATP-binding protein n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J112_9BACL
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EST13527.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolacticus DSM 442.;"
ABC transporter ATP-binding protein
L2_041_000G1_scaffold_204_26
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(28221..30059)
DNA (1839bp) protein (613aa)
ABC transporter permease n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J2V0_9BACL
ABC transporter permease {ECO:0000313|EMBL:EST13526.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolacticus DSM 442.;"
ABC transporter
L2_041_000G1_scaffold_204_27
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30168..30905)
DNA (738bp) protein (246aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2D9B4_CLOS4
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERI99414.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_041_000G1_scaffold_204_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30902..31615)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KK80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30528.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Response regulator of the LytR/AlgR family
L2_041_000G1_scaffold_204_29
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31838..32809
DNA (972bp) protein (324aa)
Glycoside hydrolase family 16 n=1 Tax=Clostridium sp. CAG:678 RepID=R5KKZ9_9CLOT
Glycoside hydrolase family 16 {ECO:0000313|EMBL:CCY67428.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L2_041_000G1_scaffold_204_30
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32962..33828
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41183.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
xylose isomerase domain-containing protein
Displaying items 1-30 of 65 in total

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