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L2_041_000G1_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_238_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..918
DNA (918bp) protein (306aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ34_9BIFI
LacI family transcriptional regulator {ECO:0000313|EMBL:KEF28684.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
LacI family transcriptional regulator
L2_041_000G1_scaffold_238_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1051..2745)
DNA (1695bp) protein (565aa)
Glycosyl hydrolase, family 43 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ35_9BIFI
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:KEF28685.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
alpha-L-arabinofuranosidase
L2_041_000G1_scaffold_238_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3019..4365)
DNA (1347bp) protein (449aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Xylose isomerase n=2 Tax=Bifidobacterium RepID=B6XVS1_9BIFI
xylose isomerase
L2_041_000G1_scaffold_238_4
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4598..5878
DNA (1281bp) protein (427aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVS0_9BIFI
Putative O-acetylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:BAR01370.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
O-acetylhomoserine (thiol)-lyase
L2_041_000G1_scaffold_238_5
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6177..7676)
DNA (1500bp) protein (500aa)
Amidohydrolase family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVR9_9BIFI
Amidohydrolase family protein {ECO:0000313|EMBL:EEB21240.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR01369.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
amidohydrolase
L2_041_000G1_scaffold_238_6
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7871..8314
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVR8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21239.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L2_041_000G1_scaffold_238_7
unknown

Not on your lists

comp(8419..8523)
DNA (105bp) protein (35aa)

This feature has no annotations

L2_041_000G1_scaffold_238_8
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8542..9993)
DNA (1452bp) protein (484aa)
Putative riboflavin biosynthesis protein RibD n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVR7_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ14078.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_041_000G1_scaffold_238_9
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10164..11087
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NY58_9BIFI
Beta-lactamase {ECO:0000313|EMBL:KFI86584.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
hypothetical protein
L2_041_000G1_scaffold_238_10
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11246..12922
DNA (1677bp) protein (559aa)
ATP-binding cassette protein, ChvD family n=2 Tax=Bifidobacterium RepID=B6XVR4_9BIFI
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIZ14071.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_041_000G1_scaffold_238_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13470..14393
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q542_9BIFI
Acyl-CoA thioesterase {ECO:0000313|EMBL:KEF28760.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
acyl-CoA thioesterase
L2_041_000G1_scaffold_238_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14400..14951)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8Q7_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF28759.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
membrane protein
L2_041_000G1_scaffold_238_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14948..16471)
DNA (1524bp) protein (508aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ66_9BIFI
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KEF28758.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
sulD; aldolase-pyrophosphokinase
L2_041_000G1_scaffold_238_14
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16570..17448)
DNA (879bp) protein (293aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
Dihydropteroate synthase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVR0_9BIFI
dihydropteroate synthase
L2_041_000G1_scaffold_238_15
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17512..18150)
DNA (639bp) protein (213aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
GTP cyclohydrolase 1 n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PYW1_9BIFI
GTP cyclohydrolase
L2_041_000G1_scaffold_238_16
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18150..20252)
DNA (2103bp) protein (701aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NRU5_9BIFI
ATPase AAA
L2_041_000G1_scaffold_238_17
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20249..20821)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P2G9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14904.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypoxanthine phosphoribosyltransferase
L2_041_000G1_scaffold_238_18
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20799..21893)
DNA (1095bp) protein (365aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVQ6_9BIFI
tRNA(Ile)-lysidine synthetase
L2_041_000G1_scaffold_238_19
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21898..23343)
DNA (1446bp) protein (482aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ72_9BIFI
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:AIZ14063.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_041_000G1_scaffold_238_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23423..24646)
DNA (1224bp) protein (408aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ73_9BIFI
N-acetylglucosaminyltransferase {ECO:0000313|EMBL:KEF28751.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
N-acetylglucosaminyltransferase
L2_041_000G1_scaffold_238_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24646..26184)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BQ74_9BIFI
Putative transport protein {ECO:0000313|EMBL:BAR03109.1}; Uncharacterized protein {ECO:0000313|EMBL:EEG71637.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
membrane protein
L2_041_000G1_scaffold_238_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26239..27162
DNA (924bp) protein (308aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEG71638.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG71638.1};; Putative glycosyltransferase {ECO:0000313|EMBL:BAR03108.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ75_9BIFI
glycosyl transferase
L2_041_000G1_scaffold_238_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27369..28520)
DNA (1152bp) protein (384aa)
Lactaldehyde reductase n=2 Tax=Bifidobacterium RepID=C0BQ77_9BIFI
1,2-propanediol oxidoreductase {ECO:0000313|EMBL:KEF28748.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
1,2-propanediol oxidoreductase
L2_041_000G1_scaffold_238_24
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28706..30943)
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NQX0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14583.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
putative diguanylate cyclase (GGDEF) domain protein
L2_041_000G1_scaffold_238_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30936..31586)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ79_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71642.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
putative membrane spanning protein
L2_041_000G1_scaffold_238_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31691..32515)
DNA (825bp) protein (275aa)
VTC domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ80_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR03104.1}; VTC domain protein {ECO:0000313|EMBL:EEG71643.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
transporter
L2_041_000G1_scaffold_238_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32505..34319)
DNA (1815bp) protein (605aa)
CotH protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ81_9BIFI
CotH protein {ECO:0000313|EMBL:EEG71644.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR03103.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
spore coat protein CotH
L2_041_000G1_scaffold_238_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34316..35860)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ82_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71645.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
putative membrane spanning protein
L2_041_000G1_scaffold_238_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35862..36725)
DNA (864bp) protein (288aa)
Glycosyltransferase {ECO:0000313|EMBL:BAR03101.1}; Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEG71646.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG71646.1};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ83_9BIFI
Glycosyl transferase (group 1)
L2_041_000G1_scaffold_238_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36694..37293)
DNA (600bp) protein (200aa)
Glycosyltransferase {ECO:0000313|EMBL:BAR03101.1}; Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEG71646.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG71646.1};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ83_9BIFI
Glycosyl transferase (group 1)
Displaying items 1-30 of 54 in total

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