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L2_041_000G1_scaffold_240

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_240_1
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..3806)
DNA (3804bp) protein (1268aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8X0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17129.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ATP-dependent helicase
L2_041_000G1_scaffold_240_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3836..4051)
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BS07_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR03859.1}; Uncharacterized protein {ECO:0000313|EMBL:EEG70957.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
XRE family transcriptional regulator
L2_041_000G1_scaffold_240_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4053..4586)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6Q5B8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR03860.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_041_000G1_scaffold_240_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4893..6230
DNA (1338bp) protein (446aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BS10_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF28248.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
membrane protein
L2_041_000G1_scaffold_240_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6215..7420)
DNA (1206bp) protein (402aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium RepID=C0BS11_9BIFI
MFS transporter {ECO:0000313|EMBL:KEF28247.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
MFS transporter
L2_041_000G1_scaffold_240_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7627..9957)
DNA (2331bp) protein (777aa)
DNA gyrase, B subunit, C-terminal domain protein n=2 Tax=Bifidobacterium RepID=C0BS12_9BIFI
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:BAR03863.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
DNA gyrase subunit B
L2_041_000G1_scaffold_240_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10043..11419)
DNA (1377bp) protein (459aa)
RNA polymerase sigma factor SigA n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS13_9BIFI
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
RNA polymerase sigma factor
L2_041_000G1_scaffold_240_8
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11581..12237)
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BS14_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17140.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_041_000G1_scaffold_240_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12444..13538
DNA (1095bp) protein (365aa)
Polyprenyl synthetase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS15_9BIFI
Isoprenyl diphosphate synthase {ECO:0000313|EMBL:BAR03867.1}; Polyprenyl synthetase {ECO:0000313|EMBL:EEG70965.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
serralysin
L2_041_000G1_scaffold_240_10
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13680..15890
DNA (2211bp) protein (737aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q5C8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17142.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
serine/threonine protein kinase
L2_041_000G1_scaffold_240_11
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15985..16689)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NYF0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17143.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
acyl-phosphate glycerol 3-phosphate acyltransferase
L2_041_000G1_scaffold_240_12
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16711..17313
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8Y0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17144.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
membrane protein
L2_041_000G1_scaffold_240_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17463..18515)
DNA (1053bp) protein (351aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Anthranilate phosphoribosyltransferase n=2 Tax=Bifidobacterium RepID=C0BS19_9BIFI
anthranilate phosphoribosyltransferase
L2_041_000G1_scaffold_240_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18775..21651)
DNA (2877bp) protein (959aa)
Protein translocase subunit SecA n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q5D3_9BIFI
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
preprotein translocase subunit SecA
L2_041_000G1_scaffold_240_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21864..22523)
DNA (660bp) protein (220aa)
Ribosomal subunit interface protein n=2 Tax=Bifidobacterium RepID=C0BS22_9BIFI
30S ribosomal protein S30 {ECO:0000313|EMBL:KEF28237.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
30S ribosomal protein S30
L2_041_000G1_scaffold_240_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23137..23817)
DNA (681bp) protein (227aa)
Putative regulatory protein RecX n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS23_9BIFI
Putative regulatory protein {ECO:0000313|EMBL:BAR03875.1}; Putative regulatory protein RecX {ECO:0000313|EMBL:EEG70973.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
RecX family transcriptional regulator
L2_041_000G1_scaffold_240_17
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(23821..25005)
DNA (1185bp) protein (395aa)
Protein RecA n=2 Tax=Bifidobacterium RepID=C0BS24_9BIFI
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
recombinase RecA
L2_041_000G1_scaffold_240_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25261..25554)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Bifidobacterium PF77_9BIFI">RepID=R6PF77_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17151.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_041_000G1_scaffold_240_19
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25582..26094)
DNA (513bp) protein (171aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bifidobacterium RepID=C0BS26_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17152.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
XRE family transcriptional regulator
L2_041_000G1_scaffold_240_20
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26155..26721)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8Y9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17154.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
damage-inducible protein CinA
L2_041_000G1_scaffold_240_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26729..27409)
DNA (681bp) protein (227aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Bifidobacterium RepID=C0BS28_9BIFI
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KEF28232.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
L2_041_000G1_scaffold_240_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27477..30308)
DNA (2832bp) protein (944aa)
FtsK/SpoIIIE family protein n=2 Tax=Bifidobacterium RepID=C0BS29_9BIFI
Cell division protein FtsK {ECO:0000313|EMBL:BAR03881.1}; FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EEG70979.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
cell division protein FtsK
L2_041_000G1_scaffold_240_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30473..31519)
DNA (1047bp) protein (349aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
tRNA dimethylallyltransferase n=2 Tax=Bifidobacterium RepID=C0BS30_9BIFI
tRNA delta(2)-isopentenylpyrophosphate transferase
L2_041_000G1_scaffold_240_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31503..32957)
DNA (1455bp) protein (485aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=Bifidobacterium RepID=C0BS31_9BIFI
(dimethylallyl)adenosine tRNA methylthiotransferase
L2_041_000G1_scaffold_240_25
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33009..33830
DNA (822bp) protein (274aa)
RelA/SpoT domain protein n=2 Tax=Bifidobacterium RepID=C0BS32_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17159.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
(p)ppGpp synthetase
L2_041_000G1_scaffold_240_26
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33817..34812)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6P137_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17160.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
membrane protein
L2_041_000G1_scaffold_240_27
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35030..35875)
DNA (846bp) protein (282aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BS34_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17161.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
membrane protein
L2_041_000G1_scaffold_240_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36031..36855)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q5E4_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF28225.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L2_041_000G1_scaffold_240_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37021..38370
DNA (1350bp) protein (450aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BS36_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70986.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
atypical histidine kinase sensor of two-component system
L2_041_000G1_scaffold_240_30
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38358..39059
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=2 Tax=Bifidobacterium RepID=C0BS37_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17166.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
response regulator of two-component system
Displaying items 1-30 of 50 in total

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