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L2_041_000G1_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_244_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(904..1506)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23423.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
formate/nitrite transporter
L2_041_000G1_scaffold_244_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1719..4943
DNA (3225bp) protein (1075aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase, large subunit n=2 Tax=Clostridium RepID=B6FU07_9CLOT
L2_041_000G1_scaffold_244_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5128..9243
DNA (4116bp) protein (1372aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU06_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EEA80500.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
metallophosphoesterase
L2_041_000G1_scaffold_244_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9400..10794
DNA (1395bp) protein (465aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase, major domain protein n=2 Tax=Clostridium RepID=B6FU05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23420.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_041_000G1_scaffold_244_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10787..11368
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23419.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
guanylate kinase
L2_041_000G1_scaffold_244_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11454..12443
DNA (990bp) protein (330aa)
Putative DNA polymerase III, subunit gamma and tau n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU03_9CLOT
Putative DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EEA80497.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_244_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12447..13358
DNA (912bp) protein (304aa)
PSP1 C-terminal domain protein n=2 Tax=Clostridium RepID=B6FU02_9CLOT
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EEA80496.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterized homolog of PSP1
L2_041_000G1_scaffold_244_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13348..14088
DNA (741bp) protein (247aa)
Methyltransferase domain protein n=2 Tax=Clostridium RepID=B6FU01_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EEA80495.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_244_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14104..14943
DNA (840bp) protein (280aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU00_9CLOT
conserved hypothetical protein TIGR00096
L2_041_000G1_scaffold_244_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15067..16179
DNA (1113bp) protein (371aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ9_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80493.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_041_000G1_scaffold_244_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16242..17570
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ8_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEA80492.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_244_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17781..20384
DNA (2604bp) protein (868aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ7_9CLOT
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EEA80491.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_041_000G1_scaffold_244_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20397..21545
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80490.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted permease
L2_041_000G1_scaffold_244_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21703..22620
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80489.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_244_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22617..23942
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80488.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_244_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23939..25450
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23408.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATPase family associated with various cellular activities (AAA).
L2_041_000G1_scaffold_244_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25484..26146
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QN75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23407.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
nucleoside recognition domain containing protein
L2_041_000G1_scaffold_244_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26379..27959
DNA (1581bp) protein (527aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTZ1_9CLOT
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:EEA80485.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_244_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28018..28653)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23405.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_244_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28788..29948
DNA (1161bp) protein (387aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PRL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23404.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_041_000G1_scaffold_244_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29902..31227
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23403.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative efflux protein, MATE family
L2_041_000G1_scaffold_244_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31360..31881
DNA (522bp) protein (174aa)
Transporter gate domain protein n=2 Tax=Clostridium RepID=B6FTY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23402.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
spore maturation protein B
L2_041_000G1_scaffold_244_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32003..32164
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23401.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_244_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32454..33026
DNA (573bp) protein (191aa)
ATP synthase subunit a n=2 Tax=Clostridium RepID=B6FTY4_9CLOT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
F0F1 ATP synthase subunit A
L2_041_000G1_scaffold_244_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33058..33285
DNA (228bp) protein (76aa)
ATP synthase F0, C subunit n=2 Tax=Clostridium RepID=B6FTY3_9CLOT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_244_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33357..33860
DNA (504bp) protein (168aa)
ATP synthase subunit b n=2 Tax=Clostridium RepID=B6FTY2_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATP synthase F0 subunit B
L2_041_000G1_scaffold_244_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33841..34338
DNA (498bp) protein (166aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=2 Tax=Clostridium RepID=B6FTY1_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_041_000G1_scaffold_244_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34343..35848
DNA (1506bp) protein (502aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP synthase subunit alpha n=2 Tax=Clostridium RepID=B6FTY0_9CLOT
ATP synthase F1 subunit alpha
L2_041_000G1_scaffold_244_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35850..36743
DNA (894bp) protein (298aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=2 Tax=Clostridium RepID=B6FTX9_9CLOT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_041_000G1_scaffold_244_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36765..38156
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP synthase subunit beta n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTX8_9CLOT
F-type H+-transporting ATPase subunit beta
Displaying items 1-30 of 55 in total

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