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L2_041_000G1_scaffold_248

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_248_1
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..482
DNA (480bp) protein (160aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:KJF40192.1}; EC=2.5.1.49 {ECO:0000313|EMBL:KJF40192.1};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
O-acetylhomoserine (thiol)-lyase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTY7_9FIRM
L2_041_000G1_scaffold_248_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

479..1687
DNA (1209bp) protein (403aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTY8_9FIRM
L2_041_000G1_scaffold_248_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1830..3173
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTZ1_9FIRM
Multidrug transporter MatE {ECO:0000313|EMBL:KJF40168.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ypnP2; multidrug resistance protein YpnP
L2_041_000G1_scaffold_248_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3279..3911)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69389.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_041_000G1_scaffold_248_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4181..5581
DNA (1401bp) protein (467aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69390.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_041_000G1_scaffold_248_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5721..6170
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69391.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Beta-galactosidase, beta subunit
L2_041_000G1_scaffold_248_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6276..6902
DNA (627bp) protein (209aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
uridine/cytidine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTZ5_9FIRM
L2_041_000G1_scaffold_248_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7049..7810
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69393.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
TipAS antibiotic-recognition domain-containing protein
L2_041_000G1_scaffold_248_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7934..8587)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTZ7_9FIRM
GNAT family acetyltraansferase {ECO:0000313|EMBL:KJF40174.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_041_000G1_scaffold_248_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8671..9483
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69395.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
MerR family transcriptional regulator
L2_041_000G1_scaffold_248_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9513..10502)
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69396.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
microcin self-immunity protein MccF
L2_041_000G1_scaffold_248_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10618..11679)
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69397.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_041_000G1_scaffold_248_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11760..11927
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69398.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_041_000G1_scaffold_248_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12069..12998)
DNA (930bp) protein (310aa)
L-lactate dehydrogenase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU04_9FIRM
L-lactate dehydrogenase {ECO:0000313|EMBL:EHL69401.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L-lactate dehydrogenase
L2_041_000G1_scaffold_248_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13147..14352
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69402.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Sugar phosphate permease
L2_041_000G1_scaffold_248_16
Selenomonas artemidis, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14899..15600
DNA (702bp) protein (234aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=749551 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas artemidis F0399.;"
DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase n=1 Tax=Selenomonas artemidis F0399 RepID=E7N596_9FIRM
L2_041_000G1_scaffold_248_17
Selenomonas artemidis, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15593..16885
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Selenomonas artemidis F0399 RepID=E7N597_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW28671.1}; TaxID=749551 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas artemidis F0399.;"
hypothetical protein
L2_041_000G1_scaffold_248_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17155..18105)
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69403.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_041_000G1_scaffold_248_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18191..19501)
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69404.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
major facilitator superfamily protein
L2_041_000G1_scaffold_248_20
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19525..20286)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU08_9FIRM
GlcNAc-PI de-N-acetylase {ECO:0000313|EMBL:KJF40182.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
GlcNAc-PI de-N-acetylase
L2_041_000G1_scaffold_248_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20529..21611
DNA (1083bp) protein (361aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40183.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
cell envelope-related function transcriptional attenuator common domain
L2_041_000G1_scaffold_248_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21687..22013)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38791.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_041_000G1_scaffold_248_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22234..23775)
DNA (1542bp) protein (514aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU12_9FIRM
galactose-1-phosphate uridylyltransferase
L2_041_000G1_scaffold_248_24
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24259..25644
DNA (1386bp) protein (462aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU13_9FIRM
L2_041_000G1_scaffold_248_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25699..25830)
DNA (132bp) protein (44aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69411.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_041_000G1_scaffold_248_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25919..26911)
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69412.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_041_000G1_scaffold_248_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27057..28400
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU16_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHL69413.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative efflux protein, MATE family
L2_041_000G1_scaffold_248_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28531..29130)
DNA (600bp) protein (200aa)
HD domain protein n=7 Tax=Clostridium difficile RepID=G6B6U8_CLODI
Phosphohydrolase {ECO:0000313|EMBL:KJF38786.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
metal dependent phosphohydrolase
L2_041_000G1_scaffold_248_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29209..30180)
DNA (972bp) protein (324aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Glutamyl-and glutaminyl-tRNA synthetases (EC:6.1.1.- 6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RN37_9FIRM
L2_041_000G1_scaffold_248_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30164..30994)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RN38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75962.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
Displaying items 1-30 of 62 in total

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