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L2_041_000G1_scaffold_266

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_266_1
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1425)
DNA (1425bp) protein (475aa)
putative RNA methyltransferase CTC_02481 (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sp. CAG:413 RepID=R6NCE4_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDC09823.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L2_041_000G1_scaffold_266_2
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1922..3214
DNA (1293bp) protein (431aa)
Major facilitator superfamily MFS_1 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TA68_9CLOT
MFS transporter {ECO:0000313|EMBL:KEZ89413.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
major facilitator superfamily transporter
L2_041_000G1_scaffold_266_3
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3259..4392
DNA (1134bp) protein (378aa)
Anaerobic sulfatase maturase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AKY1_9CLOT
Anaerobic sulfatase maturase {ECO:0000313|EMBL:ERI66509.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
anaerobic sulfatase-maturase
L2_041_000G1_scaffold_266_4
Paenibacillus wynnii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4544..6226)
DNA (1683bp) protein (561aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus lactis 154 RepID=G4HNI9_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KGE17897.1}; TaxID=268407 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus wynnii.;"
hypothetical protein
L2_041_000G1_scaffold_266_5
Clostridium sp. CAG:508, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6285..6578)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:508 RepID=R6QLI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC31736.1}; TaxID=1262815 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:508.;"
hypothetical protein
L2_041_000G1_scaffold_266_6
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6728..7822
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJ27_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
GTP-binding protein YchF
L2_041_000G1_scaffold_266_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7903..8226)
DNA (324bp) protein (108aa)
Predicted transcriptional regulators n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJG2_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL10492.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_041_000G1_scaffold_266_8
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8358..10070
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EH77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89387.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
L2_041_000G1_scaffold_266_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10163..12079
DNA (1917bp) protein (639aa)
NHL repeat containing protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5X7_9CLOT
NHL repeat containing protein {ECO:0000313|EMBL:CCX50970.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L2_041_000G1_scaffold_266_10
Drosophila melanogaster, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

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12107..12832
DNA (726bp) protein (242aa)
Salivary glue protein Sgs-3 n=1 Tax=Drosophila melanogaster RepID=SGS3_DROME
Salivary glue protein Sgs-3; Flags: Precursor;; TaxID=7227 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.;" source="Drosophila melanogaster (Fruit fly).;"
N-acetylglucosaminyl phosphatidylinositol deacetylase
L2_041_000G1_scaffold_266_11
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13038..13889)
DNA (852bp) protein (284aa)
Prephenate dehydrogenase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3M0_9FIRM
Prephenate dehydrogenase {ECO:0000313|EMBL:CCY92191.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
prephenate dehydrogenase
L2_041_000G1_scaffold_266_12
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(14013..14564)
DNA (552bp) protein (184aa)
UPF0340 protein BN515_00802 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LL13_9FIRM
UPF0340 protein BN515_00802 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
conserved hypothetical protein TIGR01440
L2_041_000G1_scaffold_266_13
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14647..15186)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CQU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79093.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L2_041_000G1_scaffold_266_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15274..16650)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45995.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
MATE efflux family protein
L2_041_000G1_scaffold_266_15
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16776..17954)
DNA (1179bp) protein (393aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
alr; Alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NI56_9CLOT
L2_041_000G1_scaffold_266_16
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18304..20142
DNA (1839bp) protein (613aa)
GTP-binding protein TypA n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XVM2_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:CDA19143.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
GTP-binding protein TypA/BipA
L2_041_000G1_scaffold_266_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20180..20986
DNA (807bp) protein (269aa)
amidohydrolase 2 (EC:3.5.1.-)
Amidohydrolase 2 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYA8_9FIRM
Amidohydrolase 2 {ECO:0000313|EMBL:CDB42883.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L2_041_000G1_scaffold_266_18
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21215..22894
DNA (1680bp) protein (560aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Glutamate--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YRH7_9FIRM
glutamyl-tRNA synthetase
L2_041_000G1_scaffold_266_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22881..24545
DNA (1665bp) protein (555aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IUL6_9FIRM
L2_041_000G1_scaffold_266_20
unknown

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24593..25243
DNA (651bp) protein (217aa)

This feature has no annotations

L2_041_000G1_scaffold_266_21
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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25499..26095
DNA (597bp) protein (199aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C707_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS72794.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
L2_041_000G1_scaffold_266_22
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26088..27467
DNA (1380bp) protein (460aa)
MATE efflux family protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C708_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDS72795.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
hypothetical protein
L2_041_000G1_scaffold_266_23
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(27703..28356)
DNA (654bp) protein (218aa)
Transcriptional regulator, TetR family n=2 Tax=Leptospira licerasiae RepID=I0XVU6_9LEPT
TetR family transcriptional regulator
Tax=BJP_IG2069_Spirochaetales_48_31
L2_041_000G1_scaffold_266_24
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28651..29463)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MYI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90027.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L2_041_000G1_scaffold_266_25
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29507..30517)
DNA (1011bp) protein (337aa)
tkt2; transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HUT6_9FIRM
Transketolase {ECO:0000313|EMBL:CDB41638.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L2_041_000G1_scaffold_266_26
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30520..31389)
DNA (870bp) protein (290aa)
Transketolase domain protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y388_9FIRM
Transketolase domain protein {ECO:0000313|EMBL:CDA19289.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
transketolase
L2_041_000G1_scaffold_266_27
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31494..32756)
DNA (1263bp) protein (421aa)
Aminotransferase class-III n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HX88_9FIRM
Aminotransferase class-III {ECO:0000313|EMBL:CDB41640.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
aminotransferase class-III
L2_041_000G1_scaffold_266_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32774..33541)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I897_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41641.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L2_041_000G1_scaffold_266_29
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34210..35541)
DNA (1332bp) protein (444aa)
Glutamine synthetase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IY30_9FIRM
Glutamine synthetase {ECO:0000313|EMBL:CDB42882.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
glutamine synthetase, type I
L2_041_000G1_scaffold_266_30
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35751..37013)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01421.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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