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L2_041_000G1_scaffold_267

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_267_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..584)
DNA (582bp) protein (194aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=Clostridiales RepID=G9YNG6_9FIRM
L2_041_000G1_scaffold_267_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(683..1105)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0N9R1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN37050.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_041_000G1_scaffold_267_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1297..2367)
DNA (1071bp) protein (357aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV37_9FIRM
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L2_041_000G1_scaffold_267_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2364..4022)
DNA (1659bp) protein (553aa)
SpoIID/LytB domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV38_9FIRM
SpoIID/LytB domain protein {ECO:0000313|EMBL:EDN00239.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_041_000G1_scaffold_267_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4301..5389
DNA (1089bp) protein (363aa)
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C2A8_9CLOT
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ERI78635.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_041_000G1_scaffold_267_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5394..6329
DNA (936bp) protein (312aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C743_9FIRM
dihydrodipicolinate synthase
L2_041_000G1_scaffold_267_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6305..6769)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35256.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
N-acetyltransferase GCN5
L2_041_000G1_scaffold_267_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7075..8289)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00181.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
permease
L2_041_000G1_scaffold_267_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8328..9554)
DNA (1227bp) protein (409aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNI1_9FIRM
L2_041_000G1_scaffold_267_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(9605..10024)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41342.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_041_000G1_scaffold_267_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10255..11955)
DNA (1701bp) protein (567aa)
DNA repair protein RecN n=2 Tax=Clostridiales RepID=H1C739_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
recN; DNA repair protein RecN
L2_041_000G1_scaffold_267_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11989..12441)
DNA (453bp) protein (151aa)
Arginine repressor n=3 Tax=Clostridiales RepID=G9YNI3_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
argR; arginine repressor
L2_041_000G1_scaffold_267_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12443..13306)
DNA (864bp) protein (288aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=3 Tax=Clostridiales RepID=G9YNI4_9FIRM
L2_041_000G1_scaffold_267_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13303..14112)
DNA (810bp) protein (270aa)
Ribosomal RNA large subunit methyltransferase J n=2 Tax=Oscillibacter RepID=U2RN59_9FIRM
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:ERK54968.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative hemolysin
L2_041_000G1_scaffold_267_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14063..16042)
DNA (1980bp) protein (660aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUY9_9FIRM
L2_041_000G1_scaffold_267_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16033..16500)
DNA (468bp) protein (156aa)
Divergent PAP2 family protein n=3 Tax=Clostridiales RepID=G9YNI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35621.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_041_000G1_scaffold_267_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16518..17393)
DNA (876bp) protein (292aa)
polyprenyl diphosphate synthase (EC:2.5.1.-)
Polyprenyl synthetase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUZ1_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:EDN00192.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_041_000G1_scaffold_267_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17390..17629)
DNA (240bp) protein (80aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
xseB; exonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=2 Tax=Clostridiales RepID=H1C732_9FIRM
L2_041_000G1_scaffold_267_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17611..18849)
DNA (1239bp) protein (413aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
xseA; exonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ARH4_9CLOT
L2_041_000G1_scaffold_267_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18846..19793)
DNA (948bp) protein (316aa)
Putative DNA-binding/iron metalloprotein/AP endonuclease n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C5S7_9CLOT
Putative DNA-binding/iron metalloprotein/AP endonuclease {ECO:0000313|EMBL:ERI62691.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
peptidase M22 glycoprotease
L2_041_000G1_scaffold_267_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19790..20281)
DNA (492bp) protein (164aa)
N utilization substance protein B homolog n=3 Tax=Clostridiales RepID=G9YNJ2_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
nusB; antitermination protein NusB
L2_041_000G1_scaffold_267_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20458..20841)
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YNJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35615.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_041_000G1_scaffold_267_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20951..21553)
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2ARH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35614.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
spoIIIAH; putative stage III sporulation protein AH
L2_041_000G1_scaffold_267_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21565..22089)
DNA (525bp) protein (175aa)
Stage III sporulation protein AG n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C726_9FIRM
Stage III sporulation protein AG {ECO:0000313|EMBL:EHO35613.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
spoIIIAG; putative stage III sporulation protein AG
L2_041_000G1_scaffold_267_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22086..22580)
DNA (495bp) protein (165aa)
Putative stage III sporulation protein AF n=2 Tax=Clostridiales RepID=G9YNJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55978.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_041_000G1_scaffold_267_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22583..23680)
DNA (1098bp) protein (366aa)
Stage III sporulation protein AE n=2 Tax=Clostridiales RepID=H1C724_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55977.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoIIIAE; putative stage III sporulation protein AE
L2_041_000G1_scaffold_267_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23695..24081)
DNA (387bp) protein (129aa)
Stage III sporulation protein AD n=3 Tax=Clostridiales RepID=H1C723_9FIRM
Stage III sporulation protein AD {ECO:0000313|EMBL:EHO35610.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
stage III sporulation protein AD
L2_041_000G1_scaffold_267_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24088..24282)
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=3 Tax=Clostridiales RepID=G9YNJ9_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:EHM53457.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
stage III sporulation protein AC
L2_041_000G1_scaffold_267_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24307..24819)
DNA (513bp) protein (171aa)
Stage III sporulation protein AB n=3 Tax=Clostridiales RepID=H1C721_9FIRM
Putative stage III sporulation protein AB {ECO:0000313|EMBL:EHM53458.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
stage III sporulation protein SpoAB
L2_041_000G1_scaffold_267_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24813..25751)
DNA (939bp) protein (313aa)
Putative stage III sporulation protein AA n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55973.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoIIIAA; stage III sporulation protein AA
Displaying items 1-30 of 63 in total

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