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L2_041_000G1_scaffold_298

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_298_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..531)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52770.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transcriptional regulator, TetR family
L2_041_000G1_scaffold_298_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

930..1235
DNA (306bp) protein (102aa)
Putative arsenical resistance operon repressor n=3 Tax=Clostridiales RepID=G9YPM2_9FIRM
Putative arsenical resistance operon repressor {ECO:0000313|EMBL:ERI63326.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ArsR family transcriptional regulator
L2_041_000G1_scaffold_298_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1330..2337
DNA (1008bp) protein (336aa)
Putative permease n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPM3_9FIRM
Putative permease {ECO:0000313|EMBL:EHM52539.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Predicted permeases
L2_041_000G1_scaffold_298_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2351..2719
DNA (369bp) protein (123aa)
Redox-active disulfide protein 2 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52773.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
small redox-active disulfide protein 2
L2_041_000G1_scaffold_298_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2762..3829
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52774.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
phosphomannose isomerase
L2_041_000G1_scaffold_298_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3887..4141)
DNA (255bp) protein (85aa)
Heavy metal-associated domain protein n=2 Tax=Clostridiales RepID=G9YV65_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:ERI65012.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Copper chaperone
L2_041_000G1_scaffold_298_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4225..4710)
DNA (486bp) protein (162aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
Formate dehydrogenase subunit gamma family protein n=2 Tax=Clostridiales RepID=U2B008_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25919.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_041_000G1_scaffold_298_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4707..5813)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=H1CK79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25918.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ribosome small subunit-dependent GTPase A
L2_041_000G1_scaffold_298_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5928..6212)
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YV68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52778.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_041_000G1_scaffold_298_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6662..7120
DNA (459bp) protein (153aa)
Toxin-antitoxin system, antitoxin component, Xre domain protein n=2 Tax=Clostridiales RepID=G9YV70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25916.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative Xre family DNA-binding protein
L2_041_000G1_scaffold_298_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7198..7431)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2AU77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25915.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_041_000G1_scaffold_298_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7598..8017
DNA (420bp) protein (140aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridiales RepID=G9YV72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25914.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Transcriptional regulators
L2_041_000G1_scaffold_298_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8014..9768
DNA (1755bp) protein (585aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6E6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52782.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC transporter
L2_041_000G1_scaffold_298_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9743..11587
DNA (1845bp) protein (615aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AS50_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI62945.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type multidrug transport system, ATPase and permease components
L2_041_000G1_scaffold_298_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11675..12061
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27894.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative DtxR family transcriptional regulator
L2_041_000G1_scaffold_298_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12118..12537)
DNA (420bp) protein (140aa)
Flavodoxin n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ04_9FIRM
Flavodoxin {ECO:0000313|EMBL:EHO27893.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_041_000G1_scaffold_298_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12588..13151)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27892.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_041_000G1_scaffold_298_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13422..14378
DNA (957bp) protein (319aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
tRNA-dihydrouridine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ02_9FIRM
dihydrouridine synthase family protein
L2_041_000G1_scaffold_298_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14383..15453
DNA (1071bp) protein (357aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAW7_9CLOT
L2_041_000G1_scaffold_298_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15505..16398
DNA (894bp) protein (298aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Putative glutamyl-queuosine tRNA(Asp) synthetase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV82_9FIRM
Putative glutamyl-queuosine tRNA(Asp) synthetase {ECO:0000313|EMBL:EHM40803.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_041_000G1_scaffold_298_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16458..17504)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27888.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L2_041_000G1_scaffold_298_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17510..18088)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF51980.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_041_000G1_scaffold_298_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18189..21095
DNA (2907bp) protein (969aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
TIGR00375 family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV86_9FIRM
hypothetical protein
L2_041_000G1_scaffold_298_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21175..22575)
DNA (1401bp) protein (467aa)
Putative HTH-type transcriptional regulatory protein GabR n=3 Tax=Clostridiales RepID=G9YV87_9FIRM
Putative HTH-type transcriptional regulatory protein GabR {ECO:0000313|EMBL:EHM40808.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
transcriptional regulator
L2_041_000G1_scaffold_298_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22771..23541
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=3 Tax=Clostridiales RepID=G9YV88_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative RNA polymerase sigma factor
L2_041_000G1_scaffold_298_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24073..25155
DNA (1083bp) protein (361aa)
TIGR00300 family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF51985.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_041_000G1_scaffold_298_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25210..26157)
DNA (948bp) protein (316aa)
Transporter, auxin efflux carrier family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF51986.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Predicted permeases
L2_041_000G1_scaffold_298_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26293..26556
DNA (264bp) protein (88aa)
Sporulation protein, YlmC/YmxH family n=3 Tax=Clostridiales RepID=G9YKS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF51987.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
YlmC/YmxH family sporulation protein
L2_041_000G1_scaffold_298_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26624..28456
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
glmS; glucosamine-6-phosphate synthase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CQH6_9CLOT
L2_041_000G1_scaffold_298_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28468..30033
DNA (1566bp) protein (522aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKS2_9FIRM
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EHM55258.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ABC-type dipeptide transport system, periplasmic component
Displaying items 1-30 of 56 in total

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