ggKbase home page

L2_041_000G1_scaffold_325

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_325_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7S2_CLOBU
bacterial endoU nuclease
Bacterial endoU nuclease {ECO:0000313|EMBL:AGX44617.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_041_000G1_scaffold_325_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(517..1506)
DNA (990bp) protein (330aa)
Membrane spanning protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EX81_CLOTA
fusaric acid resistance -like family protein
Fusaric acid resistance-like family protein {ECO:0000313|EMBL:AIY84412.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_041_000G1_scaffold_325_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1683..2021)
DNA (339bp) protein (113aa)
Putative Alkylphosphonate utilization operon protein PhnA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENY1_9CLOT
phnA family protein
PhnA family protein {ECO:0000313|EMBL:AIY82693.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_041_000G1_scaffold_325_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2200..2628)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B9R8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84938.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_041_000G1_scaffold_325_5
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2675..3556)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum NCTC 2916 RepID=B1QC25_CLOBO
Putative uncharacterized protein {ECO:0000313|EMBL:EHN14666.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
hypothetical protein
L2_041_000G1_scaffold_325_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3699..4409)
DNA (711bp) protein (237aa)
Putative nitrite/sulfite reductase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTP0_CLOPF
nitrite and sulphite reductase 4Fe-4S domain protein
Nitrite and sulphite reductase 4Fe-4S domain protein {ECO:0000313|EMBL:AIY83988.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_041_000G1_scaffold_325_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4537..5187)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B139_CLOA9
Uncharacterized protein {ECO:0000313|EMBL:KJU72917.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_041_000G1_scaffold_325_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5191..5604)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQW2_CLOPF
MarR family transcriptional regulator {ECO:0000313|EMBL:KJU72916.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_041_000G1_scaffold_325_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5749..8853)
DNA (3105bp) protein (1035aa)
Putative helicase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRZ6_CLOP1
Helicase {ECO:0000313|EMBL:KJU72915.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
DEAD/DEAH box helicase family protein
L2_041_000G1_scaffold_325_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8999..9508
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ESJ4_9CLOT
L,D-transpeptidase catalytic domain protein
L,D-transpeptidase catalytic domain protein {ECO:0000313|EMBL:AIY84442.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_041_000G1_scaffold_325_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9693..10130
DNA (438bp) protein (146aa)
Transcriptional regulator n=1 Tax=Clostridium pasteurianum BC1 RepID=R4JY78_CLOPA
MarR family transcriptional regulator {ECO:0000313|EMBL:KJU72914.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
marR family protein
L2_041_000G1_scaffold_325_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10223..11572
DNA (1350bp) protein (450aa)
Predicted cation efflux pump n=2 Tax=Clostridium kluyveri RepID=A5N2Z8_CLOK5
Multidrug transporter MatE {ECO:0000313|EMBL:KJU72913.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
MATE efflux family protein
L2_041_000G1_scaffold_325_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11717..12520)
DNA (804bp) protein (268aa)
MerR family transcriptional regulator n=1 Tax=Bacillus sp. 105MF RepID=UPI0003687F82
MerR family transcriptional regulator {ECO:0000313|EMBL:KJU72912.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
merR regulatory family protein
L2_041_000G1_scaffold_325_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12652..13284
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003713C52
GNAT family acetyltransferase {ECO:0000313|EMBL:KJU72911.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
acetyltransferase domain protein
L2_041_000G1_scaffold_325_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13355..13798)
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TJQ4_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84450.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_041_000G1_scaffold_325_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13818..14195)
DNA (378bp) protein (126aa)
Glyoxalase family protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TDG3_CLOSG
Glyoxalase {ECO:0000313|EMBL:KJU72910.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein
L2_041_000G1_scaffold_325_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14320..15597)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Bacillus vallismortis RepID=UPI000289B973
Uncharacterized protein {ECO:0000313|EMBL:KJU72909.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
tetratricopeptide repeat family protein
L2_041_000G1_scaffold_325_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15728..16981)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU72908.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
L2_041_000G1_scaffold_325_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16981..17709)
DNA (729bp) protein (243aa)
Putative Two component transcriptional regulator,LytTR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN00_9CLOT
response regulator
Response regulator {ECO:0000313|EMBL:AIY83167.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_041_000G1_scaffold_325_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17916..18056)
DNA (141bp) protein (47aa)
cyclic lactone autoinducer peptide family protein
Cyclic lactone autoinducer peptide family protein {ECO:0000313|EMBL:AIY85002.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_041_000G1_scaffold_325_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18050..18616)
DNA (567bp) protein (189aa)
Accessory protein regulator protein B n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU72906.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
accessory regulator B family protein
L2_041_000G1_scaffold_325_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18961..19233
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KJU72905.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_041_000G1_scaffold_325_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19344..20036)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Bacillus cereus HuA4-10 RepID=J7ZUM8_BACCE
Uncharacterized protein {ECO:0000313|EMBL:KJU72904.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_041_000G1_scaffold_325_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20476..21228
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSD0_CLOBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83783.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_041_000G1_scaffold_325_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21257..21685
DNA (429bp) protein (143aa)
lacA; isomerase/acetyltransferase (EC:5.3.1.26)
Galactose-6-phosphate isomerase, LacA subunit n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QHC2_9BACI
Galactose-6-phosphate isomerase {ECO:0000313|EMBL:KJU72899.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_041_000G1_scaffold_325_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21697..22212
DNA (516bp) protein (172aa)
Galactose-6-phosphate isomerase {ECO:0000313|EMBL:KJU72898.1}; EC=5.3.1.26 {ECO:0000313|EMBL:KJU72898.1};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
lacB; galactose-6-phosphate isomerase subunit lacB (EC:5.3.1.26)
Galactose-6-phosphate isomerase subunit lacB n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QHC3_9BACI
L2_041_000G1_scaffold_325_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22232..23086
DNA (855bp) protein (285aa)
Tagatose-bisphosphate aldolase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFP6_9CLOT
Tagatose-bisphosphate aldolase {ECO:0000313|EMBL:KJU72897.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
class II aldolase, tagatose bisphosphate family
L2_041_000G1_scaffold_325_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23102..24034
DNA (933bp) protein (311aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
pfkB; 1-phosphofructokinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=4 Tax=Clostridium butyricum RepID=B1R029_CLOBU
L2_041_000G1_scaffold_325_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24100..24600)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SR96_CLOC7
Uncharacterized protein {ECO:0000313|EMBL:KJU72895.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_041_000G1_scaffold_325_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24955..25332
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3M9_9CLOT
ABC transporter family protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJU72892.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Displaying items 1-30 of 65 in total

View Taxonomy