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L2_041_000G1_scaffold_330

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_330_1
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(320..697)
DNA (378bp) protein (126aa)
Single-stranded DNA-binding protein n=2 Tax=Clostridium RepID=A6M3L1_CLOB8
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_041_000G1_scaffold_330_2
unknown

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comp(799..1314)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037BFA7F
L2_041_000G1_scaffold_330_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2422..2946)
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042, ECO:0000313|EMBL:AIY79813.1}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042, ECO:0000313|EMBL:AIY79813.1};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
lepB; signal peptidase I (EC:3.4.21.89)
signal peptidase I n=1 Tax=Clostridium botulinum RepID=UPI00037AB5F5
L2_041_000G1_scaffold_330_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3402..4433)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00035DD9C9
Diguanylate cyclase domain protein {ECO:0000313|EMBL:KIE44660.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
diguanylate cyclase domain-containing protein
L2_041_000G1_scaffold_330_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4506..7112)
DNA (2607bp) protein (869aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00036E32A9
Uncharacterized protein {ECO:0000313|EMBL:KIE45135.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_041_000G1_scaffold_330_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7112..7852)
DNA (741bp) protein (247aa)
Putative cell wall binding protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUT7_9CLOT
Putative cell wall binding protein {ECO:0000313|EMBL:EKQ56410.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
cell wall binding repeat-containing protein
L2_041_000G1_scaffold_330_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8046..9011)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003637843
Uncharacterized protein {ECO:0000313|EMBL:KIE44502.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_041_000G1_scaffold_330_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9011..9514)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000364EDCB
Uncharacterized protein {ECO:0000313|EMBL:KIE44898.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_041_000G1_scaffold_330_9
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9517..10287)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037CE52F
cell wall hydrolase SleB
Cell wall hydrolase, SleB {ECO:0000313|EMBL:ABO49869.1}; Flags: Precursor;; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
L2_041_000G1_scaffold_330_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10353..10766)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037C0181
Uncharacterized protein {ECO:0000313|EMBL:KIE44412.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_041_000G1_scaffold_330_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10794..12821)
DNA (2028bp) protein (676aa)
hypothetical protein, partial n=1 Tax=Clostridium botulinum RepID=UPI00036E3AFA
Putative membrane protein {ECO:0000313|EMBL:KIE44860.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
pPPM1a_128; hypothetical protein
L2_041_000G1_scaffold_330_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12809..14605)
DNA (1797bp) protein (599aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003627ABB
Type II/IV secretion system family protein {ECO:0000313|EMBL:KIE45058.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Flp pilus assembly protein, ATPase CpaF
L2_041_000G1_scaffold_330_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14619..15449)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000362D2A9
AAA domain protein {ECO:0000313|EMBL:KIE44655.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
nucleotide binding domain-containing protein
L2_041_000G1_scaffold_330_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15451..16266)
DNA (816bp) protein (272aa)
zmpB; zinc metalloprotease ZmpB (EC:3.4.24.-)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000365CF8F
SAF-like family protein {ECO:0000313|EMBL:KIE44712.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_041_000G1_scaffold_330_15
unknown

Not on your lists

comp(16270..17907)
DNA (1638bp) protein (546aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037F70C2
L2_041_000G1_scaffold_330_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18480..19121)
DNA (642bp) protein (214aa)
Type IV pilus assembly PilZ n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M180_CLOB8
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABR36360.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_041_000G1_scaffold_330_17
unknown

Not on your lists

comp(19230..19934)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003617E55
L2_041_000G1_scaffold_330_18
unknown

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20095..20277
DNA (183bp) protein (61aa)

This feature has no annotations

L2_041_000G1_scaffold_330_19
unknown

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comp(20316..21218)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00038139C1
L2_041_000G1_scaffold_330_20
unknown

Not on your lists

comp(21222..21797)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003684BFC
L2_041_000G1_scaffold_330_21
unknown

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comp(21834..22448)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000370E26C
L2_041_000G1_scaffold_330_22
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22464..24551)
DNA (2088bp) protein (696aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00036AF4EF
Secreted protein containing domain of murein hydrolase
Secreted protein containing domain of murein hydrolase (MLTA homolog) {ECO:0000313|EMBL:AAK80004.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L2_041_000G1_scaffold_330_23
unknown

Not on your lists

comp(24561..27179)
DNA (2619bp) protein (873aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037710CC
L2_041_000G1_scaffold_330_24
Clostridium sp. CAG:793, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27194..29176)
DNA (1983bp) protein (661aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003788314
Uncharacterized protein {ECO:0000313|EMBL:CCY99214.1}; TaxID=1262840 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:793.;"
hypothetical protein
L2_041_000G1_scaffold_330_25
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29169..30143)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037D004E
Uncharacterized protein {ECO:0000313|EMBL:CDE10415.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L2_041_000G1_scaffold_330_26
unknown

Not on your lists

comp(30146..30463)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00035C1DE5
L2_041_000G1_scaffold_330_27
unknown

Not on your lists

comp(30555..30959)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037B6770
L2_041_000G1_scaffold_330_28
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(31256..32914)
DNA (1659bp) protein (553aa)
Ig-like domain-containing surface protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W942_DESOD
Chitin binding protein {ECO:0000313|EMBL:AKB38581.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
Ig-like domain-containing surface protein
L2_041_000G1_scaffold_330_29
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32926..34005)
DNA (1080bp) protein (360aa)
Probable cell surface protein (Leucine-rich repeat protein) n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GW20_FLAPJ
flavobacterium repeat protein
Flavobacterium repeat protein {ECO:0000313|EMBL:AIJ36692.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
L2_041_000G1_scaffold_330_30
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34062..37904)
DNA (3843bp) protein (1281aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V3H9_CLOBA
hypothetical protein
Collagenolytic protease {ECO:0000313|EMBL:CCZ03863.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
Displaying items 1-30 of 42 in total

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