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L2_041_000G1_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_397_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..1190)
DNA (1188bp) protein (396aa)
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Staphylococcus epidermidis BCM-HMP0060 RepID=C5Q8E0_STAEP
gram-positive signal peptide, YSIRK family domain protein
Gram-positive signal peptide protein, YSIRK family {ECO:0000313|EMBL:EFE59554.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_397_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1319..1522)
DNA (204bp) protein (68aa)
Uncharacterized protein n=15 Tax=Staphylococcus epidermidis RepID=Q8CSZ1_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59553.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_397_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1529..2269
DNA (741bp) protein (247aa)
RNA methyltransferase, TrmH family n=31 Tax=Staphylococcus epidermidis RepID=C5Q8E2_STAEP
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFE59552.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
RNA 2'-O ribose methyltransferase substrate binding family protein
L2_041_000G1_scaffold_397_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2637..3695
DNA (1059bp) protein (353aa)
pheS; phenylalanine--tRNA ligase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00281};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; Short=PheRS {ECO:0000255|HAMAP-Rule:MF_00281};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Phenylalanine--tRNA ligase alpha subunit n=39 Tax=Staphylococcus epidermidis RepID=SYFA_STAES
L2_041_000G1_scaffold_397_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3695..6097
DNA (2403bp) protein (801aa)
pheT; phenylalanine--tRNA ligase, beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00283};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283}; Short=PheRS {ECO:0000255|HAMAP-Rule:MF_00283};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Phenylalanine--tRNA ligase beta subunit n=10 Tax=Staphylococcus epidermidis RepID=C5Q8E4_STAEP
L2_041_000G1_scaffold_397_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6149..7075)
DNA (927bp) protein (309aa)
rnhC; ribonuclease HIII (EC:3.1.26.4)
Ribonuclease HIII {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088219}; Short=RNase HIII {ECO:0000256|HAMAP-Rule:MF_00053};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088223};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ribonuclease HIII n=11 Tax=Staphylococcus epidermidis RepID=C5Q8E5_STAEP
L2_041_000G1_scaffold_397_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7329..7595
DNA (267bp) protein (89aa)
Uncharacterized protein n=80 Tax=Staphylococcus epidermidis RepID=Q5HQ33_STAEQ
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_041_000G1_scaffold_397_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7596..8117
DNA (522bp) protein (174aa)
CvpA family protein n=14 Tax=Staphylococcus epidermidis RepID=C5Q8E7_STAEP
Colicin V production protein
CvpA family protein {ECO:0000313|EMBL:EFE59547.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_397_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8192..9901
DNA (1710bp) protein (570aa)
PHP domain protein {ECO:0000313|EMBL:EFE59546.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFE59546.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
PHP domain protein n=1 Tax=Staphylococcus epidermidis BCM-HMP0060 RepID=C5Q8E8_STAEP
DNA polymerase X family
L2_041_000G1_scaffold_397_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9911..12259
DNA (2349bp) protein (783aa)
Endonuclease MutS2 {ECO:0000255|HAMAP-Rule:MF_00092}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00092};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Endonuclease MutS2 n=12 Tax=Staphylococcus epidermidis RepID=C5Q8E9_STAEP
mutS2; mutS2 protein
L2_041_000G1_scaffold_397_11
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12518..12832
DNA (315bp) protein (105aa)
Thioredoxin n=80 Tax=Staphylococcus epidermidis RepID=THIO_STAEQ
trxA; thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_041_000G1_scaffold_397_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12930..14714
DNA (1785bp) protein (595aa)
UvrABC system protein C n=7 Tax=Staphylococcus epidermidis RepID=D1WMD0_STAEP
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
uvrC; excinuclease ABC subunit C
L2_041_000G1_scaffold_397_13
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15081..15695
DNA (615bp) protein (205aa)
Succinate dehydrogenase cytochrome b-558 n=52 Tax=Staphylococcus epidermidis RepID=Q8CPL3_STAES
Succinate dehydrogenase cytochrome b558 subunit
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:ETJ08950.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_041_000G1_scaffold_397_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15848..17614
DNA (1767bp) protein (589aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:EFE59541.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EFE59541.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit n=42 Tax=Staphylococcus epidermidis RepID=Q8CPL2_STAES
L2_041_000G1_scaffold_397_15
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17614..18456
DNA (843bp) protein (281aa)
Succinate dehydrogenase iron-sulfur protein (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur protein subunit n=52 Tax=Staphylococcus epidermidis RepID=Q8CPL1_STAES
Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:ETJ08952.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_041_000G1_scaffold_397_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18619..19422
DNA (804bp) protein (268aa)
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Glutamate racemase n=45 Tax=Staphylococcus epidermidis RepID=MURI_STAES
L2_041_000G1_scaffold_397_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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19437..20024
DNA (588bp) protein (196aa)
Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP,XTP-specific) (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Non-canonical purine NTP pyrophosphatase n=47 Tax=Staphylococcus epidermidis RepID=NTPA_STAES
L2_041_000G1_scaffold_397_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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20017..20526
DNA (510bp) protein (170aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Phosphodiesterase family protein n=33 Tax=Staphylococcus epidermidis RepID=C5Q8F7_STAEP
phosphoesterase, putative
L2_041_000G1_scaffold_397_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21224..21751
DNA (528bp) protein (176aa)
Uncharacterized protein n=14 Tax=Staphylococcus epidermidis RepID=C5Q8F8_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59536.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_397_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22522..22653
DNA (132bp) protein (44aa)
Uncharacterized protein n=13 Tax=Staphylococcus epidermidis RepID=C5Q8F9_STAEP
hypothetical protein
Phenol soluble modulin beta 1 {ECO:0000313|EMBL:ESV20187.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_041_000G1_scaffold_397_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22709..22843
DNA (135bp) protein (45aa)
Uncharacterized protein n=46 Tax=Staphylococcus epidermidis RepID=Q8CSY2_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59534.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_397_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22895..23029
DNA (135bp) protein (45aa)
Phenol soluble modulin beta 1 n=85 Tax=Staphylococcus epidermidis RepID=Q5HQ19_STAEQ
hypothetical protein
Antibacterial protein 3 {ECO:0000313|EMBL:EES36401.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_041_000G1_scaffold_397_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23085..23219
DNA (135bp) protein (45aa)
Phenol soluble modulin beta 1 n=85 Tax=Staphylococcus epidermidis RepID=Q5HQ19_STAEQ
hypothetical protein
Antibacterial protein 3 {ECO:0000313|EMBL:EES36401.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_041_000G1_scaffold_397_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23327..24013
DNA (687bp) protein (229aa)
5'-nucleotidase YjjG (EC:3.1.3.5)
HAD hydrolase, TIGR02254 family {ECO:0000313|EMBL:EFE59531.1}; EC=3.8.1.2 {ECO:0000313|EMBL:EFE59531.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
HAD hydrolase, TIGR02254 family n=31 Tax=Staphylococcus epidermidis RepID=C5Q8G2_STAEP
L2_041_000G1_scaffold_397_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24122..24562)
DNA (441bp) protein (147aa)
Uncharacterized N-acetyltransferase HMPREF0794_0817 {ECO:0000256|HAMAP-Rule:MF_00824}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00824};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized N-acetyltransferase SE_0851 n=45 Tax=Staphylococcus epidermidis RepID=Y851_STAES
hypothetical protein
L2_041_000G1_scaffold_397_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24746..26359
DNA (1614bp) protein (538aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
UPF0747 protein HMPREF1387_02810 n=26 Tax=Staphylococcus RepID=J0TCJ1_STAEP
BH2577 unknown conserved protein in B. subtilis
L2_041_000G1_scaffold_397_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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26503..26934
DNA (432bp) protein (144aa)
Protein MraZ n=78 Tax=Staphylococcus epidermidis RepID=MRAZ_STAEQ
Cell division protein MraZ
Transcriptional regulator MraZ; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L2_041_000G1_scaffold_397_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26949..27884
DNA (936bp) protein (312aa)
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000255|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000255|HAMAP-Rule:MF_01007}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Ribosomal RNA small subunit methyltransferase H n=13 Tax=Staphylococcus epidermidis RepID=C5Q8G6_STAEP
L2_041_000G1_scaffold_397_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27897..28298
DNA (402bp) protein (134aa)
Cell division protein FtsL n=4 Tax=Staphylococcus epidermidis RepID=C5Q8G7_STAEP
ftsL; cell division protein FtsL
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_041_000G1_scaffold_397_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28279..30606
DNA (2328bp) protein (776aa)
Penicillin-binding protein 1 n=20 Tax=Staphylococcus epidermidis RepID=Q8CPK8_STAES
PASTA domain protein
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EFE59525.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 42 in total

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