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L2_041_000G1_scaffold_419

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_419_1
unknown

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201..338
DNA (138bp) protein (46aa)

This feature has no annotations

L2_041_000G1_scaffold_419_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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353..1900
DNA (1548bp) protein (516aa)
Resolvase, N-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTU2_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDN00855.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative site-specific recombinase
L2_041_000G1_scaffold_419_3
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1972..3189)
DNA (1218bp) protein (406aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
tryptophan synthase, beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Clostridium sp. CAG:169 RepID=R6BCG5_9CLOT
L2_041_000G1_scaffold_419_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3733..5886
DNA (2154bp) protein (718aa)
5'-nucleotidase, C-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU13_9FIRM
5'-nucleotidase, C-terminal domain protein {ECO:0000313|EMBL:EDN00360.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
5'-nucleotidase
L2_041_000G1_scaffold_419_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5975..6643)
DNA (669bp) protein (223aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET25_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEQ61169.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
TetR family transcriptional regulator
L2_041_000G1_scaffold_419_6
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6801..8201
DNA (1401bp) protein (467aa)
S-adenosylhomocysteine deaminase (EC:3.5.4.28)
S-adenosylhomocysteine deaminase n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AIE3_SEBTE
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67646.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
L2_041_000G1_scaffold_419_7
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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8247..9587
DNA (1341bp) protein (447aa)
Xanthine/uracil permeases n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E6K6_9ACTN
Xanthine/uracil permeases
Xanthine/uracil permeases {ECO:0000313|EMBL:CBL03353.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L2_041_000G1_scaffold_419_8
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9774..11384
DNA (1611bp) protein (537aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T4K0_9FIRM
two-component histidine kinase
L2_041_000G1_scaffold_419_9
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11386..12084
DNA (699bp) protein (233aa)
Transcriptional regulatory protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UC60_9FIRM
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Response regulator of citrate/malate metabolism
L2_041_000G1_scaffold_419_10
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12081..12986
DNA (906bp) protein (302aa)
Transcriptional regulator LysR family n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TKH4_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDC68341.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
MarR family transcriptional regulator
L2_041_000G1_scaffold_419_11
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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13115..14659
DNA (1545bp) protein (515aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Putative sugar ABC transporter, ATP binding protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XK14_9FIRM
Putative sugar ABC transporter, ATP binding protein {ECO:0000313|EMBL:ESL02514.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
L2_041_000G1_scaffold_419_12
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14641..15633
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TF44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68339.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
ribose transport system permease RbsC
L2_041_000G1_scaffold_419_13
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15649..16647
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T4J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68338.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
monosaccharide ABC transporter substrate-binding protein, cut2 family
L2_041_000G1_scaffold_419_14
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16663..17325
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UC54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68337.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L2_041_000G1_scaffold_419_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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17950..19494
DNA (1545bp) protein (515aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57303.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
extracellular solute-binding protein
L2_041_000G1_scaffold_419_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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19567..20493
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57304.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_041_000G1_scaffold_419_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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20509..21414
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57305.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_041_000G1_scaffold_419_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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21431..22438
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57306.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L2_041_000G1_scaffold_419_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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22431..23420
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57307.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L2_041_000G1_scaffold_419_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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23446..24486
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57308.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
aminopeptidase
L2_041_000G1_scaffold_419_21
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24559..24831)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9E4F8_CLOK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH07383.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
L2_041_000G1_scaffold_419_22
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24916..26253)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SD50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC59078.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
L2_041_000G1_scaffold_419_23
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26272..26883)
DNA (612bp) protein (204aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RZ05_9CLOT
polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase
L2_041_000G1_scaffold_419_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26930..28261)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RZ03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14739.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
UbiD family decarboxylase
L2_041_000G1_scaffold_419_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28291..29646)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0BFK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ43047.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
chlorohydrolase family protein
L2_041_000G1_scaffold_419_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29643..30278)
DNA (636bp) protein (212aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RZ02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14738.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
iron-sulfur flavoprotein
L2_041_000G1_scaffold_419_27
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(30325..31218)
DNA (894bp) protein (298aa)
Pyrimidine reductase, riboflavin biosynthesis n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8M4_SPISS
pyrimidine reductase, riboflavin biosynthesis
Pyrimidine reductase, riboflavin biosynthesis {ECO:0000313|EMBL:ADK81781.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L2_041_000G1_scaffold_419_28
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(31219..32139)
DNA (921bp) protein (307aa)
ABC transporter permease n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003656DB9
putative ABC-type transport system permease component
Putative ABC-type transport system permease component {ECO:0000313|EMBL:AHY45392.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
L2_041_000G1_scaffold_419_29
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(32132..33253)
DNA (1122bp) protein (374aa)
inner-membrane translocator n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003609B5D
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADK80311.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L2_041_000G1_scaffold_419_30
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33250..34785)
DNA (1536bp) protein (512aa)
Sugar transport ATP-binding protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q898S2_CLOTE
sugar transport ATP-binding protein
Sugar transport ATP-binding protein {ECO:0000313|EMBL:AAO35007.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).;"
Displaying items 1-30 of 37 in total

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