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L2_041_000G1_scaffold_446

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_446_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2..1519)
DNA (1518bp) protein (506aa)
Sodium/proline symporter n=23 Tax=Staphylococcus epidermidis RepID=PUTP_STAEQ
putP; sodium/proline symporter
Sodium/proline symporter; Proline permease; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_446_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1897..2199
DNA (303bp) protein (101aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=31 Tax=Staphylococcus epidermidis RepID=C5Q6F2_STAEP
L2_041_000G1_scaffold_446_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2201..3658
DNA (1458bp) protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=32 Tax=Staphylococcus epidermidis RepID=C5Q6F3_STAEP
L2_041_000G1_scaffold_446_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3671..5098
DNA (1428bp) protein (476aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00121};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=12 Tax=Staphylococcus epidermidis RepID=C5Q6F4_STAEP
L2_041_000G1_scaffold_446_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5323..6273
DNA (951bp) protein (317aa)
Lipid kinase, YegS/Rv2252/BmrU family n=31 Tax=Staphylococcus epidermidis RepID=J0EDZ2_STAEP
Putative lipid kinase {ECO:0000313|EMBL:EFE58524.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
lipid kinase
L2_041_000G1_scaffold_446_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6305..7723
DNA (1419bp) protein (473aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EFE58525.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFE58525.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=3 Tax=Staphylococcus epidermidis RepID=D4FMD2_STAEP
RNA methyltransferase-like protein
L2_041_000G1_scaffold_446_7

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7867..8409
DNA (543bp) protein (181aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q5HN38_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21436.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_446_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8719..9789
DNA (1071bp) protein (357aa)
DNA polymerase IV {ECO:0000255|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000255|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000255|HAMAP-Rule:MF_01113};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
DNA polymerase IV n=41 Tax=Staphylococcus epidermidis RepID=DPO4_STAES
hypothetical protein
L2_041_000G1_scaffold_446_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9820..10374)
DNA (555bp) protein (185aa)
DNA polymerase III polC-type (EC:2.7.7.7)
Exonuclease n=46 Tax=Staphylococcus epidermidis RepID=Q5HN40_STAEQ
Exonuclease {ECO:0000313|EMBL:EFE58528.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_446_10

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comp(10563..11063)
DNA (501bp) protein (167aa)
Ferritin n=70 Tax=Staphylococcus epidermidis RepID=FTN_STAES
ferritin-like domain protein
Ferritin {ECO:0000313|EMBL:ETJ21433.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_446_11

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11285..12598
DNA (1314bp) protein (438aa)
Mur ligase family protein n=27 Tax=Staphylococcus epidermidis RepID=Q5HN42_STAEQ
UDP-N-acetylmuramyl tripeptide synthase
Mur ligase middle protein {ECO:0000313|EMBL:ETJ21432.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_446_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12600..13325
DNA (726bp) protein (242aa)
Cobyric acid synthase, putative n=63 Tax=Staphylococcus epidermidis RepID=Q5HN43_STAEQ
Cobyric acid synthase
CobB/CobQ-like protein {ECO:0000313|EMBL:EFE58531.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_446_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13766..14302
DNA (537bp) protein (179aa)
Immunodominant antigen B, putative n=38 Tax=Staphylococcus epidermidis RepID=Q5HN44_STAEQ
Immunodominant antigen B
Uncharacterized protein {ECO:0000313|EMBL:EFE58532.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_446_14

Not on your lists

comp(14453..15439)
DNA (987bp) protein (329aa)
Uncharacterized protein n=17 Tax=Staphylococcus epidermidis RepID=C5Q6G2_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ21429.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Integral membrane protein
L2_041_000G1_scaffold_446_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15613..16368
DNA (756bp) protein (252aa)
Methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000255|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000255|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000255|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000255|HAMAP-Rule:MF_01974}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Methionine aminopeptidase n=20 Tax=Staphylococcus epidermidis RepID=MAP1_STAEQ
L2_041_000G1_scaffold_446_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16526..16912
DNA (387bp) protein (129aa)
Uncharacterized protein n=48 Tax=Staphylococcus epidermidis RepID=C5Q6G4_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58535.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_446_17

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16927..17628
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis BCM-HMP0060 RepID=C5Q6G5_STAEP
Membrane-like protein {ECO:0000313|EMBL:ETJ21426.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Transporter yvqF
L2_041_000G1_scaffold_446_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17625..18671
DNA (1047bp) protein (349aa)
Sensor protein VraS; EC=2.7.13.3;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Sensor protein VraS n=53 Tax=Staphylococcus epidermidis RepID=VRAS_STAEQ
vraS; sensor histidine kinase VraS
L2_041_000G1_scaffold_446_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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18661..19290
DNA (630bp) protein (210aa)
Response regulator protein VraR n=51 Tax=Staphylococcus epidermidis RepID=VRAR_STAEQ
Two component transcriptional regulator VraR,LuxR family
Response regulator protein VraR {ECO:0000313|EMBL:EFE58538.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_446_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19347..20525)
DNA (1179bp) protein (393aa)
Ribonuclease BN, putative n=46 Tax=Staphylococcus RepID=Q5HN51_STAEQ
yihY; YihY family inner membrane domain protein
YihY family protein {ECO:0000313|EMBL:EFE58539.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_446_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20932..21216)
DNA (285bp) protein (95aa)
Uncharacterized protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HN52_STAEQ
Hypothetical protein SAV1882
Uncharacterized protein {ECO:0000313|EMBL:EFE58540.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_446_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21224..21688)
DNA (465bp) protein (155aa)
phosphotyrosine protein phosphatase (EC:3.1.3.48)
Low molecular weight protein-tyrosine-phosphatase PtpA; EC=3.1.3.48;; Phosphotyrosine phosphatase A; Short=PTPase A;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Low molecular weight protein-tyrosine-phosphatase PtpA n=77 Tax=Staphylococcus epidermidis RepID=PTPA_STAEQ
L2_041_000G1_scaffold_446_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21829..22044
DNA (216bp) protein (72aa)
UPF0435 protein SE_1565 n=77 Tax=Staphylococcus epidermidis RepID=Y1565_STAES
Hypothetical protein YfkK
UPF0435 protein M464_0208985 {ECO:0000256|HAMAP-Rule:MF_00829}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_041_000G1_scaffold_446_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22046..23287
DNA (1242bp) protein (414aa)
Aminopeptidase family protein n=27 Tax=Staphylococcus epidermidis RepID=Q5HN55_STAEQ
aminopeptidase
Aminopeptidase family protein {ECO:0000313|EMBL:AAW54774.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_446_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23367..23897
DNA (531bp) protein (177aa)
Acyl-CoA hydrolase (EC:3.1.2.20)
Cytosolic long-chain acyl-CoA thioester hydrolase family protein n=40 Tax=Staphylococcus epidermidis RepID=Q5HN56_STAEQ
Cytosolic long-chain acyl-CoA thioester hydrolase family protein {ECO:0000313|EMBL:AAW54773.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_446_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24034..25176)
DNA (1143bp) protein (381aa)
Radical SAM superfamily domain protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HN57_STAEQ
Hypothetical protein SAV1877
Radical SAM superfamily domain protein {ECO:0000313|EMBL:AAW54772.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_446_27
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25335..25496
DNA (162bp) protein (54aa)
Uncharacterized protein n=86 Tax=Staphylococcus RepID=L7WV60_STAWS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC90239.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
L2_041_000G1_scaffold_446_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25796..26314
DNA (519bp) protein (173aa)
Uncharacterized protein SERP1413 n=45 Tax=Staphylococcus epidermidis RepID=Y1413_STAEQ
ThiJ/PfpI family protein
Intracellular protease, PfpI family {ECO:0000313|EMBL:EFE58547.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_446_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26635..27444
DNA (810bp) protein (270aa)
Monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional glycosyltransferase {ECO:0000256|HAMAP-Rule:MF_01434}; Short=MGT {ECO:0000256|HAMAP-Rule:MF_01434};; EC=2.4.-.- {ECO:0000256|HAMAP-Rule:MF_01434};; Peptidoglycan TGase {ECO:0000256|HAMAP-Rule:MF_01434}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Monofunctional glycosyltransferase n=40 Tax=Staphylococcus epidermidis RepID=MGT_STAEQ
L2_041_000G1_scaffold_446_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27722..28525
DNA (804bp) protein (268aa)
Regulatory protein RecX n=45 Tax=Staphylococcus epidermidis RepID=RECX_STAEQ
Regulatory protein recX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 42 in total

View Taxonomy