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L2_041_000G1_scaffold_473

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_473_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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162..380
DNA (219bp) protein (73aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WUF8_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY39875.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L2_041_000G1_scaffold_473_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(503..928)
DNA (426bp) protein (142aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=D1JSF5_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ52921.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L2_041_000G1_scaffold_473_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1062..1613
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=13 Tax=Bacteroides RepID=E1WUF6_BACF6
putative RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L2_041_000G1_scaffold_473_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1613..1984
DNA (372bp) protein (124aa)
Uncharacterized protein n=7 Tax=Bacteroides fragilis RepID=E1WUF5_BACF6
Uncharacterized protein {ECO:0000313|EMBL:EXZ52919.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
hypothetical protein
L2_041_000G1_scaffold_473_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2074..3087
DNA (1014bp) protein (338aa)
Low-specificity L-threonine aldolase n=7 Tax=Bacteroides RepID=Q64QV3_BACFR
putative aldolase
Uncharacterized protein {ECO:0000313|EMBL:EKA85842.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_041_000G1_scaffold_473_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3207..5420)
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I7C3_9BACE
Thioredoxin family protein {ECO:0000313|EMBL:EXZ91460.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
hypothetical protein
L2_041_000G1_scaffold_473_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5793..6077
DNA (285bp) protein (95aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I7C1_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY91186.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_041_000G1_scaffold_473_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6163..7383
DNA (1221bp) protein (407aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64QV7_BACFR
hypothetical protein
Surface antigen family protein {ECO:0000313|EMBL:EXY83513.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
L2_041_000G1_scaffold_473_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7370..9070
DNA (1701bp) protein (567aa)
Uncharacterized protein n=5 Tax=Bacteroides fragilis RepID=I3HMJ9_BACFG
Sulfatase family protein {ECO:0000313|EMBL:EXY64646.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
putative sulfatase
L2_041_000G1_scaffold_473_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9189..11000
DNA (1812bp) protein (604aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
PAS domain S-box protein n=4 Tax=Bacteroides RepID=I8X4H8_BACFG
hypothetical protein
L2_041_000G1_scaffold_473_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11302..12243
DNA (942bp) protein (314aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=I3HMJ7_BACFG
putative chaperone
Uncharacterized protein {ECO:0000313|EMBL:EIY91182.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_041_000G1_scaffold_473_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12259..12570
DNA (312bp) protein (104aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q64QW1_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD50120.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_041_000G1_scaffold_473_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12715..16740)
DNA (4026bp) protein (1342aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=I3HMJ5_BACFG
putative exported beta-galactosidase
L2_041_000G1_scaffold_473_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16973..18676)
DNA (1704bp) protein (568aa)
Acyl-CoA dehydrogenase n=10 Tax=Bacteroides RepID=Q64QW3_BACFR
putative acyl-CoA dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:EIY45751.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L2_041_000G1_scaffold_473_15
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18680..19699)
DNA (1020bp) protein (340aa)
Electron transfer flavoprotein alpha-subunit n=12 Tax=Bacteroides RepID=Q64QW4_BACFR
electron transfer flavoprotein alpha-subunit
Electron transfer flavoprotein alpha-subunit {ECO:0000313|EMBL:CDD43563.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_041_000G1_scaffold_473_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19715..20587)
DNA (873bp) protein (291aa)
Electron transfer flavoprotein beta-subunit n=14 Tax=Bacteroides RepID=Q64QW5_BACFR
electron transfer flavoprotein beta-subunit
Electron transfer flavodomain protein {ECO:0000313|EMBL:EXY64637.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
L2_041_000G1_scaffold_473_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20987..22867)
DNA (1881bp) protein (627aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q64QW6_BACFR
F5/8 type C domain protein {ECO:0000313|EMBL:EXZ77704.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
hypothetical protein
L2_041_000G1_scaffold_473_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22944..24635)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6I7B0_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EYE45687.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
putative outer membrane protein probably involved in nutrient binding
L2_041_000G1_scaffold_473_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24650..27805)
DNA (3156bp) protein (1052aa)
SusC/RagA family TonB-linked outer membrane protein n=4 Tax=Bacteroides RepID=C6I7A9_9BACE
hypothetical protein
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:EXZ20033.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
L2_041_000G1_scaffold_473_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28701..29549)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FXP9_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY91171.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L2_041_000G1_scaffold_473_21
Prevotella sp. CAG:1185, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29981..30640
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1185 RepID=R5M031_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY84935.1}; TaxID=1262921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1185.;"
hypothetical protein
L2_041_000G1_scaffold_473_22
Prevotella sp. CAG:1185, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30637..31347
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1185 RepID=R5MI39_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY84936.1}; TaxID=1262921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1185.;"
hypothetical protein
L2_041_000G1_scaffold_473_23
unknown

Not on your lists

31355..32161
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3R8I8_9BACE
L2_041_000G1_scaffold_473_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32213..34273)
DNA (2061bp) protein (687aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=5 Tax=Bacteroides RepID=C3R5G5_9BACE
Response regulator {ECO:0000313|EMBL:EXY87221.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
helicase
L2_041_000G1_scaffold_473_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34479..35423)
DNA (945bp) protein (315aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
cysK; cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=5 Tax=Bacteroides RepID=C3R5G4_9BACE
L2_041_000G1_scaffold_473_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35434..36318)
DNA (885bp) protein (295aa)
Serine O-acetyltransferase n=5 Tax=Bacteroides RepID=I8XI07_BACFG
Bacterial transferase hexapeptide family protein {ECO:0000313|EMBL:EXY63192.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
serine acetyltransferase
L2_041_000G1_scaffold_473_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36409..38703)
DNA (2295bp) protein (765aa)
Glutathione biosynthesis bifunctional protein gshAB {ECO:0000313|EMBL:EXY63191.1}; EC=6.3.2.3 {ECO:0000313|EMBL:EXY63191.1};; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
Glutamate--cysteine ligase/gamma-glutamylcysteine synthetase n=5 Tax=Bacteroides RepID=C3R5G2_9BACE
glutamate/cysteine ligase,/amino acid ligase
L2_041_000G1_scaffold_473_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38700..40043)
DNA (1344bp) protein (448aa)
MATE efflux family protein n=5 Tax=Bacteroides RepID=C3R5G1_9BACE
MATE efflux family protein {ECO:0000313|EMBL:EXY63190.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
MATE efflux family protein
L2_041_000G1_scaffold_473_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40104..40406)
DNA (303bp) protein (101aa)
Transcriptional regulator, ArsR family n=6 Tax=Bacteroidales RepID=B7B8D5_9PORP
Bacterial regulatory , arsR family protein {ECO:0000313|EMBL:EXY63189.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
transcriptional regulator, ArsR family
Displaying 29 items

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