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L2_041_000G1_scaffold_476

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_476_1
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..276)
DNA (276bp) protein (92aa)
Helicase C-terminal domain protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PC77_9BIFI
Helicase C-terminal domain protein {ECO:0000313|EMBL:CDC16136.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
DNA/RNA helicase of DEAD/DEAH box family
L2_041_000G1_scaffold_476_2
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(768..2828)
DNA (2061bp) protein (687aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6NY90_9BIFI
helicase IV
L2_041_000G1_scaffold_476_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2943..3947)
DNA (1005bp) protein (335aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bifidobacterium RepID=C0BRA4_9BIFI
Oxidoreductase {ECO:0000313|EMBL:KEF27975.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
oxidoreductase
L2_041_000G1_scaffold_476_4
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4223..4606
DNA (384bp) protein (128aa)
DNA mismatch endonuclease Vsr n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT19_9BIFI
DNA mismatch repair protein Vsr
DNA mismatch repair protein Vsr {ECO:0000313|EMBL:AIZ15015.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_041_000G1_scaffold_476_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4704..5945
DNA (1242bp) protein (414aa)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT20_9BIFI
Aminotransferase {ECO:0000313|EMBL:KEF27977.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
aminotransferase
L2_041_000G1_scaffold_476_6
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6081..6338
DNA (258bp) protein (86aa)
Ppx/GppA phosphatase family protein n=2 Tax=Bifidobacterium RepID=C0BR99_9BIFI
Putative exopolyphosphatase {ECO:0000313|EMBL:BAR02290.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L2_041_000G1_scaffold_476_7
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6345..7064
DNA (720bp) protein (240aa)
Ppx/GppA phosphatase family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT21_9BIFI
Putative exopolyphosphatase {ECO:0000313|EMBL:BAR02290.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Ppx/GppA phosphatase family protein
L2_041_000G1_scaffold_476_8
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7071..7316)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT22_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB22186.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L2_041_000G1_scaffold_476_9
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7799..8896
DNA (1098bp) protein (366aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT24_9BIFI
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EEB22187.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
endonuclease
L2_041_000G1_scaffold_476_10
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9159..9443)
DNA (285bp) protein (95aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT25_9BIFI
exonuclease VII small subunit
L2_041_000G1_scaffold_476_11
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9446..10726)
DNA (1281bp) protein (427aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Exodeoxyribonuclease 7 large subunit n=3 Tax=Bifidobacterium RepID=B6XT26_9BIFI
exodeoxyribonuclease VII large subunit
L2_041_000G1_scaffold_476_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11051..13450
DNA (2400bp) protein (800aa)
Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Bifidobacterium RepID=C0BR93_9BIFI
Ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KEF27985.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ribonucleoside-triphosphate reductase
L2_041_000G1_scaffold_476_13
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13585..14298
DNA (714bp) protein (238aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Bifidobacterium RepID=C0BSN6_9BIFI
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000313|EMBL:CDC16732.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
anaerobic ribonucleoside-triphosphate reductase activating protein
L2_041_000G1_scaffold_476_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14547..15404
DNA (858bp) protein (286aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSN5_9BIFI
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EEG71185.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04072.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_041_000G1_scaffold_476_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15385..19269
DNA (3885bp) protein (1295aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSN4_9BIFI
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EEG71184.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
activase
L2_041_000G1_scaffold_476_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19594..20865
DNA (1272bp) protein (424aa)
Putative glutamate--cysteine ligase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSN3_9BIFI
Putative glutamate--cysteine ligase {ECO:0000313|EMBL:EEG71183.1}; Putative glutamate-cysteine ligase {ECO:0000313|EMBL:BAR04070.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
gamma-glutamylcysteine synthetase
L2_041_000G1_scaffold_476_17
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21046..21675
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NX72_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16728.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
AcrR family transcriptional regulator
L2_041_000G1_scaffold_476_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22271..24397
DNA (2127bp) protein (709aa)
Beta-galactosidase trimerization domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSN0_9BIFI
Beta-galactosidase {ECO:0000313|EMBL:BAR04068.1}; Beta-galactosidase trimerization domain protein {ECO:0000313|EMBL:EEG71181.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
bga; beta-galactosidase I
L2_041_000G1_scaffold_476_19
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24431..25057)
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT35_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR02277.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEB22198.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
TetR-type transcriptional regulator
L2_041_000G1_scaffold_476_20
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25413..26738
DNA (1326bp) protein (442aa)
Transporter, major facilitator family protein n=2 Tax=root RepID=B6XT36_9BIFI
Putative transport protein {ECO:0000313|EMBL:BAR02276.1}; Transporter, major facilitator family protein {ECO:0000313|EMBL:EEB22199.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
membrane protein with transport function
L2_041_000G1_scaffold_476_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27125..28471
DNA (1347bp) protein (449aa)
Probable glucosylceramidase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2Q6_BIFAA
glucosylceramidase
Probable glucosylceramidase {ECO:0000313|EMBL:BAF39989.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_041_000G1_scaffold_476_22
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28688..29200)
DNA (513bp) protein (171aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT38_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR02274.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEB22201.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
TetR-type transcriptional regulator
L2_041_000G1_scaffold_476_23
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29648..30904
DNA (1257bp) protein (419aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT39_9BIFI
Putative transport protein {ECO:0000313|EMBL:BAR02273.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
membrane protein with transport function
L2_041_000G1_scaffold_476_24
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31061..32617
DNA (1557bp) protein (519aa)
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT40_9BIFI
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:EEB22203.1}; Putative alpha-L-arabinofuranosidase {ECO:0000313|EMBL:BAR02272.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
xsa; alpha-L-arabinofuranosidase
L2_041_000G1_scaffold_476_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32892..34100
DNA (1209bp) protein (403aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=B6XT41_9BIFI
Glycosyl hydrolase {ECO:0000313|EMBL:BAR04061.1}; Uncharacterized protein {ECO:0000313|EMBL:EEG71171.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
beta-1,3-exoglucanase
L2_041_000G1_scaffold_476_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34163..35809
DNA (1647bp) protein (549aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bifidobacterium RepID=B6XT42_9BIFI
xynB; xylan beta-1,4-xylosidase
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EEG71170.1}; Putative beta-xylosidase {ECO:0000313|EMBL:BAR04060.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_041_000G1_scaffold_476_27
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36032..37231
DNA (1200bp) protein (400aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B6XT44_9BIFI
Putative beta-1,3-exoglucanase {ECO:0000313|EMBL:BAR02269.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
beta-1,3-exoglucanase
L2_041_000G1_scaffold_476_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37279..37914
DNA (636bp) protein (212aa)
Possible TetR-type transcriptional regulator n=3 Tax=Bifidobacterium RepID=A1A2P9_BIFAA
TetR-type transcriptional regulator
TetR-type transcriptional regulator {ECO:0000313|EMBL:AII76758.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_041_000G1_scaffold_476_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38239..39426)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2P8_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39981.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_041_000G1_scaffold_476_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39466..40329)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A2P7_BIFAA
putative MFS transporter
Putative MFS transporter {ECO:0000313|EMBL:AII76756.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying 30 items

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