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L2_041_000G1_scaffold_477

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_477_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Type III pantothenate kinase n=2 Tax=Clostridium RepID=B6FUU3_9CLOT
L2_041_000G1_scaffold_477_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125..781)
DNA (657bp) protein (219aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R6QN99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23427.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_477_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1072..2271
DNA (1200bp) protein (400aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUU5_9CLOT
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EEA80192.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_041_000G1_scaffold_477_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2428..3948)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80193.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_477_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3972..4460)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PY28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23361.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_041_000G1_scaffold_477_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4460..5851)
DNA (1392bp) protein (464aa)
Transporter dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PIH2_9CLOT
Transporter dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:CDC23360.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sodium:dicarboxylate symporter
L2_041_000G1_scaffold_477_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6017..6547)
DNA (531bp) protein (177aa)
Isochorismatase family protein {ECO:0000313|EMBL:EEA80163.1}; EC=3.-.-.- {ECO:0000313|EMBL:EEA80163.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Isochorismatase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUV0_9CLOT
isochorismatase
L2_041_000G1_scaffold_477_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6562..7314)
DNA (753bp) protein (251aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EEA80164.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EEA80164.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUV1_9CLOT
L2_041_000G1_scaffold_477_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7311..8060)
DNA (750bp) protein (250aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Clostridium nexile CAG:348 RepID=R6QN22_9CLOT
L2_041_000G1_scaffold_477_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8124..8576)
DNA (453bp) protein (151aa)
Transcriptional repressor NrdR n=1 Tax=Clostridium nexile CAG:348 RepID=R6PY23_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional regulator NrdR
L2_041_000G1_scaffold_477_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8628..8888)
DNA (261bp) protein (87aa)
Sporulation protein, YlmC/YmxH family n=2 Tax=Clostridium RepID=B6FUV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23355.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
YlmC/YmxH family sporulation protein
L2_041_000G1_scaffold_477_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8934..10148)
DNA (1215bp) protein (405aa)
ABC-2 type transporter n=2 Tax=Clostridium RepID=B6FUV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23354.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-2 type transporter
L2_041_000G1_scaffold_477_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10149..10922)
DNA (774bp) protein (258aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FUV6_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80169.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter
L2_041_000G1_scaffold_477_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11024..12463)
DNA (1440bp) protein (480aa)
Amino acid permease n=2 Tax=Clostridium RepID=B6FUV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23352.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
yjeM; putative transporter
L2_041_000G1_scaffold_477_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12526..13923)
DNA (1398bp) protein (466aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUV8_9CLOT
L2_041_000G1_scaffold_477_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14146..14832
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PIG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23350.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
helix-turn-helix domain-containing protein
L2_041_000G1_scaffold_477_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14816..15349)
DNA (534bp) protein (178aa)
Rubrerythrin n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUW0_9CLOT
Rubrerythrin {ECO:0000313|EMBL:EEA80173.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_477_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15437..15619)
DNA (183bp) protein (61aa)
Ferredoxin n=2 Tax=Clostridium RepID=B6FUW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23348.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ferredoxin
L2_041_000G1_scaffold_477_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15676..17412)
DNA (1737bp) protein (579aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUW2_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80175.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase and permease components
L2_041_000G1_scaffold_477_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17405..19138)
DNA (1734bp) protein (578aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUW3_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80176.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase and permease components
L2_041_000G1_scaffold_477_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19305..20063)
DNA (759bp) protein (253aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FUW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23345.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
nitrate/sulfonate/bicarbonate ABC transporter permease
L2_041_000G1_scaffold_477_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20086..21177)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80178.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_477_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21231..22016)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PG50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23343.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
nitrate/sulfonate/bicarbonate ABC transporter ATPase
L2_041_000G1_scaffold_477_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22220..23392)
DNA (1173bp) protein (391aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities (EC:2.6.1.-)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QN08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23342.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_041_000G1_scaffold_477_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23556..24107
DNA (552bp) protein (184aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUW8_9CLOT
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:EEA80181.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
YbaK/prolyl-tRNA synthetase
L2_041_000G1_scaffold_477_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24130..25032
DNA (903bp) protein (301aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FUW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23340.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type multidrug transport system, ATPase component
L2_041_000G1_scaffold_477_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25007..27028
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80183.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_041_000G1_scaffold_477_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27075..28811)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PRE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23339.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
peptidase S8/S53 subtilisin kexin sedolisin
L2_041_000G1_scaffold_477_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28918..30060
DNA (1143bp) protein (381aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23338.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_041_000G1_scaffold_477_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30103..30708)
DNA (606bp) protein (202aa)
Rubrerythrin n=2 Tax=Clostridium RepID=B6FUZ7_9CLOT
Rubrerythrin {ECO:0000313|EMBL:EEA80154.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Rubrerythrin
Displaying items 1-30 of 37 in total

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