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L2_041_000G1_scaffold_498

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_498_1
unknown

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1..228
DNA (228bp) protein (76aa)

This feature has no annotations

L2_041_000G1_scaffold_498_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(245..667)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XW22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19566.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_041_000G1_scaffold_498_3
unknown

Not on your lists

comp(664..864)
DNA (201bp) protein (67aa)

This feature has no annotations

L2_041_000G1_scaffold_498_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1395..2519)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72430.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
G-D-S-L family lipolytic protein
L2_041_000G1_scaffold_498_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2580..3443)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72427.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
polysaccharide deacetylase
L2_041_000G1_scaffold_498_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3732..4817
DNA (1086bp) protein (362aa)
dehydrogenase n=1 Tax=Clostridium beijerinckii RepID=UPI0002F43862
Dehydrogenase {ECO:0000313|EMBL:ETD67359.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
oxidoreductase domain-containing protein
L2_041_000G1_scaffold_498_7
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4853..6385
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JID0_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ84296.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_041_000G1_scaffold_498_8
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6487..7998)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A2T9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37163.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
beta-lactamase
L2_041_000G1_scaffold_498_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8238..9443
DNA (1206bp) protein (402aa)
PHB depolymerase family esterase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39487.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
phospholipase/carboxylesterase
L2_041_000G1_scaffold_498_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9459..10820
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR68_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHL72418.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative efflux protein, MATE family
L2_041_000G1_scaffold_498_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10893..12596)
DNA (1704bp) protein (568aa)
sucrose phosphorylase (EC:2.4.1.7)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72445.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_041_000G1_scaffold_498_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12609..13565)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72444.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_041_000G1_scaffold_498_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13801..14994
DNA (1194bp) protein (398aa)
PHB depolymerase family esterase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW7_9FIRM
PHB depolymerase family esterase {ECO:0000313|EMBL:EHL66315.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
phospholipase/Carboxylesterase
L2_041_000G1_scaffold_498_14
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15070..15873)
DNA (804bp) protein (268aa)
xynC; Acetyl esterase (EC:3.1.-.-)
Acetyl esterase {ECO:0000313|EMBL:CDZ23538.1}; EC=3.1.-.- {ECO:0000313|EMBL:CDZ23538.1};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Esterase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JNU3_CELLD
L2_041_000G1_scaffold_498_15
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15890..17752)
DNA (1863bp) protein (621aa)
Multidrug resistance ABC transporter n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QAG9_9FIRM
Multidrug resistance ABC transporter {ECO:0000313|EMBL:CDC32805.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
putative ABC transporter permease/ATP-binding protein
L2_041_000G1_scaffold_498_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17733..19481)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46366.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC transporter
L2_041_000G1_scaffold_498_17
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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19802..21505
DNA (1704bp) protein (568aa)
HAMP domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CP31_9FIRM
HAMP domain protein {ECO:0000313|EMBL:ERI92254.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L2_041_000G1_scaffold_498_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21486..23111
DNA (1626bp) protein (542aa)
Two component transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGI8_9CLOT
Two component transcriptional regulator AraC family {ECO:0000313|EMBL:CCY41253.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_041_000G1_scaffold_498_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23080..23748
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IAQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61395.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Bacterial extracellular solute-binding protein.
L2_041_000G1_scaffold_498_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23913..25436
DNA (1524bp) protein (508aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILQ8_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CCY41254.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
extracellular solute-binding protein
L2_041_000G1_scaffold_498_21
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25648..26628
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00037ECD9C
Uncharacterized protein {ECO:0000313|EMBL:CCY29327.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
sugar ABC transporter permease
L2_041_000G1_scaffold_498_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26644..27564
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72414.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
binding-protein-dependent transport system inner membrane protein
L2_041_000G1_scaffold_498_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27581..29068
DNA (1488bp) protein (496aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72417.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
beta-lactamase
L2_041_000G1_scaffold_498_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29175..29891
DNA (717bp) protein (239aa)
Uncharacterized protein n=3 Tax=root RepID=C7GF54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99552.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_041_000G1_scaffold_498_25
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

29903..31078
DNA (1176bp) protein (392aa)
Putative sugar ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S3Q1_9FIRM
Putative sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ45479.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative sugar ABC transporter ATP-binding protein
L2_041_000G1_scaffold_498_26
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(31615..32556)
DNA (942bp) protein (314aa)
Endo-1,4-beta-xylanase B n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A0F3_9PLAN
Endo-1,4-beta-xylanase B {ECO:0000313|EMBL:EAQ77773.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
esterase
L2_041_000G1_scaffold_498_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32573..33493)
DNA (921bp) protein (307aa)
Xylose isomerase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XGU3_9CLOT
Xylose isomerase {ECO:0000313|EMBL:ENY98922.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
AP-endonuclease/AP-lyase
L2_041_000G1_scaffold_498_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33490..34620)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32463.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
oxidoreductase
L2_041_000G1_scaffold_498_29
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34675..36108)
DNA (1434bp) protein (478aa)
Succinate-semialdehyde dehydrogenase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6N5_9CLOT
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CCX36672.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
NAD-dependent aldehyde dehydrogenase
L2_041_000G1_scaffold_498_30
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36121..36957)
DNA (837bp) protein (279aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6N7_9CLOT
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:CCX36677.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
xylose isomerase domain-containing protein
Displaying items 1-30 of 32 in total

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