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L2_041_000G1_scaffold_501

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_501_1
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(98..751)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P7C1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14421.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Serine/threonine protein kinase
L2_041_000G1_scaffold_501_2
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(774..1523)
DNA (750bp) protein (250aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium RepID=C0BU14_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14419.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
putative ABC transporter
L2_041_000G1_scaffold_501_3
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1525..2442)
DNA (918bp) protein (306aa)
ABC transporter transmembrane region n=2 Tax=Bifidobacterium RepID=C0BU15_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14417.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC-type multidrug transport system, ATPase and permease
L2_041_000G1_scaffold_501_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2435..3304)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU16_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70867.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
DSBA oxidoreductase
L2_041_000G1_scaffold_501_5
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3950..4663)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NQC1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14413.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_041_000G1_scaffold_501_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4848..5597
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU18_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70869.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_041_000G1_scaffold_501_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5742..7103)
DNA (1362bp) protein (454aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Trigger factor n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU19_9BIFI
trigger factor
L2_041_000G1_scaffold_501_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7156..8451)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PXZ2_9BIFI
Ribonuclease D {ECO:0000313|EMBL:KEF29404.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ribonuclease D
L2_041_000G1_scaffold_501_9
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8444..9076)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NQW6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14578.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_041_000G1_scaffold_501_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9270..10151)
DNA (882bp) protein (294aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P1N5_9BIFI
pyruvate formate lyase-activating protein
L2_041_000G1_scaffold_501_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10271..12646)
DNA (2376bp) protein (792aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EEG70876.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EEG70876.1};; Formate acetyltransferase {ECO:0000313|EMBL:BAR03789.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Formate C-acetyltransferase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU25_9BIFI
formate acetyltransferase
L2_041_000G1_scaffold_501_12
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12834..13028)
DNA (195bp) protein (65aa)
Uncharacterized protein n=4 Tax=root RepID=B6XU33_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ14767.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_041_000G1_scaffold_501_13
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13075..14772)
DNA (1698bp) protein (566aa)
NAD+ synthase {ECO:0000313|EMBL:EEB21615.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EEB21615.1};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
NAD+ synthase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU32_9BIFI
NAD+ synthetase
L2_041_000G1_scaffold_501_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14850..15998)
DNA (1149bp) protein (383aa)
Amidohydrolase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU28_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR03792.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_041_000G1_scaffold_501_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16131..16931
DNA (801bp) protein (267aa)
Cof-like hydrolase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU29_9BIFI
Hydrolase {ECO:0000313|EMBL:KEF29397.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
putative Had-type hydrolase
L2_041_000G1_scaffold_501_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17128..17973
DNA (846bp) protein (282aa)
Lipoprotein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU30_9BIFI
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
TonB-dependent receptor
L2_041_000G1_scaffold_501_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18061..18879
DNA (819bp) protein (273aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU31_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG70882.1}; Putative ABC transporter ATP-binding component {ECO:0000313|EMBL:BAR03795.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
D-methionine ABC transporter
L2_041_000G1_scaffold_501_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18881..19561
DNA (681bp) protein (227aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU32_9BIFI
Metal ABC transporter permease {ECO:0000313|EMBL:KEF29394.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC-type metal ion transport system, permease component
L2_041_000G1_scaffold_501_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20064..20474
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU33_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70884.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
putative secreted protein
L2_041_000G1_scaffold_501_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20989..21690)
DNA (702bp) protein (234aa)
Abi family protein n=2 Tax=Bifidobacterium longum RepID=B7GQK2_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:BAR03799.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Abi family protein
L2_041_000G1_scaffold_501_21
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21790..21993)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R2P7_BIFLM
Uncharacterized protein {ECO:0000313|EMBL:BAR02077.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L2_041_000G1_scaffold_501_22
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22248..22916)
DNA (669bp) protein (223aa)
Transposase n=2 Tax=Bifidobacterium RepID=K2HTE1_BIFBI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29446.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
transposase, IS3
L2_041_000G1_scaffold_501_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23054..23515)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU38_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29391.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
transposase
L2_041_000G1_scaffold_501_24
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24103..24450
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU39_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR02079.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L2_041_000G1_scaffold_501_25
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24708..27377
DNA (2670bp) protein (890aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8W3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17119.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_041_000G1_scaffold_501_26
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27527..28906)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P100_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17120.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
multidrug transporter MatE
L2_041_000G1_scaffold_501_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29249..29788
DNA (540bp) protein (180aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=2 Tax=Bifidobacterium RepID=C0BRZ8_9BIFI
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:BAR03850.1}; Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EEG70948.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
peptidylprolyl isomerase
L2_041_000G1_scaffold_501_28
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29908..32229)
DNA (2322bp) protein (774aa)
RelA/SpoT family protein n=2 Tax=Bifidobacterium RepID=C0BRZ9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17122.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
GTP pyrophosphokinase
L2_041_000G1_scaffold_501_29
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32383..32859)
DNA (477bp) protein (159aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Bifidobacterium RepID=C0BS01_9BIFI
deoxyuridine 5'-triphosphate nucleotidohydrolase
L2_041_000G1_scaffold_501_30
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32859..33152)
DNA (294bp) protein (98aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B6XTS6_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEB21596.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Displaying items 1-30 of 34 in total

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