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L2_041_000G1_scaffold_521

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_521_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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520..1053
DNA (534bp) protein (178aa)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EES37257.1}; EC=2.3.1.57 {ECO:0000313|EMBL:EES37257.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Spermidine N1-acetyltransferase, putative n=61 Tax=Staphylococcus epidermidis RepID=Q5HRS5_STAEQ
spermidine N1-acetyltransferase
L2_041_000G1_scaffold_521_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1082..2419
DNA (1338bp) protein (446aa)
Arginine decarboxylase / Lysine decarboxylase (EC:4.1.1.19)
Orn/Lys/Arg decarboxylase n=36 Tax=Staphylococcus epidermidis RepID=Q5HRS4_STAEQ
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFE60076.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_521_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2423..3034
DNA (612bp) protein (204aa)
Thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Thymidylate kinase n=47 Tax=Staphylococcus epidermidis RepID=KTHY_STAEQ
L2_041_000G1_scaffold_521_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3068..3397
DNA (330bp) protein (110aa)
Uncharacterized protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HRS2_STAEQ
protein from nitrogen regulatory protein P-II (GLNB) family, ortholog YAAQ B. subtilis
Uncharacterized protein {ECO:0000313|EMBL:ESV18557.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_041_000G1_scaffold_521_5

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3703..4629
DNA (927bp) protein (309aa)
DNA polymerase III delta prime subunit (EC:2.7.7.7)
DNA polymerase III, delta prime subunit, putative n=35 Tax=Staphylococcus epidermidis RepID=Q5HRS1_STAEQ
DNA-directed DNA polymerase III delta' subunit {ECO:0000313|EMBL:ETJ21219.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_521_6

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4631..5434
DNA (804bp) protein (268aa)
Uncharacterized protein n=70 Tax=Staphylococcus epidermidis RepID=Q5HRS0_STAEQ
signal peptidase II-like protein
Signal peptidase II family protein {ECO:0000313|EMBL:ETJ21220.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_521_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5481..5798
DNA (318bp) protein (106aa)
Initiation-control protein YabA n=82 Tax=Staphylococcus RepID=YABA_STAEQ
DNA replication intiation control protein YabA
Initiation-control protein YabA {ECO:0000256|SAAS:SAAS00063209}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_521_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5894..6619
DNA (726bp) protein (242aa)
Methyltransferase small domain protein {ECO:0000313|EMBL:EFE60082.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFE60082.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Methyltransferase small domain protein n=7 Tax=Staphylococcus epidermidis RepID=C5Q652_STAEP
hypothetical protein
L2_041_000G1_scaffold_521_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6612..6860
DNA (249bp) protein (83aa)
UPF0213 protein SERP0126 n=52 Tax=Staphylococcus epidermidis RepID=Y126_STAEQ
COG2827: putative endonuclease containing a URI domain
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EFE60083.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_521_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6862..7701
DNA (840bp) protein (280aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Ribosomal RNA small subunit methyltransferase I n=45 Tax=Staphylococcus epidermidis RepID=Q5HRR6_STAEQ
tetrapyrrole family methyltransferase
L2_041_000G1_scaffold_521_11

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7911..9881
DNA (1971bp) protein (657aa)
Methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=14 Tax=Staphylococcus epidermidis RepID=C5Q655_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ21225.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_521_12

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9906..10679
DNA (774bp) protein (258aa)
Hydrolase, TatD family n=15 Tax=Staphylococcus RepID=C5Q656_STAEP
TatD deoxyribonuclease {ECO:0000313|EMBL:ETJ21226.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Putative deoxyribonuclease YcfH
L2_041_000G1_scaffold_521_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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10886..11431
DNA (546bp) protein (182aa)
Ribonuclease M5 (EC:3.1.26.8)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Ribonuclease M5 n=51 Tax=Staphylococcus epidermidis RepID=Q5HRR3_STAEQ
L2_041_000G1_scaffold_521_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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11432..12322
DNA (891bp) protein (297aa)
Dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ribosomal RNA small subunit methyltransferase A n=48 Tax=Staphylococcus epidermidis RepID=RSMA_STAEQ
L2_041_000G1_scaffold_521_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12422..12685
DNA (264bp) protein (88aa)
Uncharacterized protein n=85 Tax=Staphylococcus RepID=Q5HRR1_STAEQ
Veg protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53477.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_041_000G1_scaffold_521_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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13078..13926
DNA (849bp) protein (283aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=49 Tax=Staphylococcus epidermidis RepID=ISPE_STAEQ
L2_041_000G1_scaffold_521_17

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13941..14765
DNA (825bp) protein (275aa)
Pur operon repressor n=48 Tax=Staphylococcus epidermidis RepID=Q5HRQ9_STAEQ
purR; pur operon repressor
Purine operon repressor {ECO:0000313|EMBL:ETJ21231.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_521_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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14787..15167
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP, putative n=65 Tax=Staphylococcus epidermidis RepID=Q5HRQ8_STAEQ
Endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ESV18571.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_041_000G1_scaffold_521_19
Staphylococcus capitis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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15227..15535
DNA (309bp) protein (103aa)
Putative septation protein SpoVG n=84 Tax=Staphylococcus RepID=SP5G_STAEQ
spoVG; regulatory protein SpoVG
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1296619 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus capitis CR01.;"
L2_041_000G1_scaffold_521_20

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16145..17500
DNA (1356bp) protein (452aa)
N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase (EC:2.7.7.23)
Bifunctional protein GlmU n=47 Tax=Staphylococcus epidermidis RepID=GLMU_STAEQ
Bifunctional protein GlmU {ECO:0000313|EMBL:ETJ21234.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_521_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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17644..18609
DNA (966bp) protein (322aa)
Ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ribose-phosphate pyrophosphokinase n=83 Tax=Staphylococcus epidermidis RepID=KPRS_STAEQ
L2_041_000G1_scaffold_521_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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18779..19438
DNA (660bp) protein (220aa)
50S ribosomal protein L25 n=48 Tax=Staphylococcus epidermidis RepID=RL25_STAEQ
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_521_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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19691..20263
DNA (573bp) protein (191aa)
Peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Peptidyl-tRNA hydrolase n=55 Tax=Staphylococcus epidermidis RepID=PTH_STAEQ
L2_041_000G1_scaffold_521_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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20269..23769
DNA (3501bp) protein (1167aa)
Transcription-repair-coupling factor {ECO:0000255|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000255|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000255|HAMAP-Rule:MF_00969};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Transcription-repair-coupling factor n=1 Tax=Staphylococcus epidermidis BCM-HMP0060 RepID=C5Q666_STAEP
mfd; transcription-repair coupling factor
L2_041_000G1_scaffold_521_25

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23759..25300
DNA (1542bp) protein (514aa)
Polysaccharide biosynthesis protein n=19 Tax=Staphylococcus epidermidis RepID=D1WL67_STAEP
polysaccharide biosynthesis protein
Virulence factor MVIN {ECO:0000313|EMBL:ETJ21239.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_521_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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25297..26487
DNA (1191bp) protein (397aa)
Tetrapyrrole methylase family protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HRQ0_STAEQ
tetrapyrrole methylase
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EFE60100.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_521_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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26484..26747
DNA (264bp) protein (88aa)
S4 domain protein n=18 Tax=Staphylococcus epidermidis RepID=C5Q669_STAEP
S4 domain protein
S4 domain protein {ECO:0000313|EMBL:EFE60101.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_521_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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26771..27172
DNA (402bp) protein (134aa)
Cell-division protein DivIC, putative n=53 Tax=Staphylococcus epidermidis RepID=Q5HRP8_STAEQ
cell-division initiation protein
Septum formation initiator {ECO:0000313|EMBL:EFE60102.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_521_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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27266..27667
DNA (402bp) protein (134aa)
S1 RNA binding domain protein n=10 Tax=Staphylococcus epidermidis RepID=C5Q671_STAEP
RNA binding protein, contains ribosomal protein S1 domain
S1 RNA binding domain protein {ECO:0000313|EMBL:EFE60103.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_041_000G1_scaffold_521_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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27945..29243
DNA (1299bp) protein (433aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
tRNA(Ile)-lysidine synthase n=17 Tax=Staphylococcus epidermidis RepID=C5Q673_STAEP
tRNA(Ile)-lysidine synthetase
Displaying items 1-30 of 38 in total

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