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L2_041_000G1_scaffold_885

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_885_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..338
DNA (336bp) protein (112aa)
Colanic acid biosynthesis pyruvyl transferase WcaK {ECO:0000313|EMBL:KDX19756.1}; EC=2.-.-.- {ECO:0000313|EMBL:KDX19756.1};; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-210-07_S3_C3.;"
Colanic acid biosynthesis pyruvyl transferase WcaK n=1 Tax=Escherichia coli MS 16-3 RepID=E6ALH7_ECOLX
wcaK; Colanic acid biosysnthesis protein WcaK
L2_041_000G1_scaffold_885_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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335..1555
DNA (1221bp) protein (407aa)
Colanic acid biosynthesis glycosyltransferase WcaL n=23 Tax=Escherichia coli RepID=L3B5K8_ECOLX
Colanic acid biosynthesis glycosyltransferase WcaL {ECO:0000313|EMBL:EZE02230.1}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
wcaL; glycosyl transferase family protein
L2_041_000G1_scaffold_885_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1566..2960
DNA (1395bp) protein (465aa)
Colanic acid biosynthesis protein WcaM n=24 Tax=Escherichia coli RepID=E6ALH5_ECOLX
Colanic acid biosynthesis protein WcaM {ECO:0000313|EMBL:EOW07319.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
wcaM; putative colanic acid biosynthesis protein
L2_041_000G1_scaffold_885_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3135..4028
DNA (894bp) protein (298aa)
UTP-glucose-1-phosphate uridylyltransferase n=3 Tax=Escherichia coli RepID=L3C6P5_ECOLX
galF; putative regulatory subunit for GalU
UTP-glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ELD99619.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L2_041_000G1_scaffold_885_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4401..5486
DNA (1086bp) protein (362aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
rfbB; dTDP-glucose-4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=25 Tax=Escherichia coli RepID=Q5GFN1_ECOLX
L2_041_000G1_scaffold_885_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5486..6385
DNA (900bp) protein (300aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=22 Tax=Escherichia coli RepID=E6ALH2_ECOLX
RmlD {ECO:0000313|EMBL:AAT85648.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_041_000G1_scaffold_885_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6444..7322
DNA (879bp) protein (293aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Glucose-1-phosphate thymidylyltransferase n=24 Tax=Escherichia coli RepID=E6ALH1_ECOLX
rfbA; glucose-1-phosphate thymidylyltransferase
L2_041_000G1_scaffold_885_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7327..7875
DNA (549bp) protein (183aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=24 Tax=Escherichia coli RepID=E6ALH0_ECOLX
RmlC {ECO:0000313|EMBL:AAT85650.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase
L2_041_000G1_scaffold_885_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7887..9125
DNA (1239bp) protein (413aa)
Wzx n=25 Tax=Escherichia coli RepID=Q5GFM7_ECOLX
Wzx {ECO:0000313|EMBL:AAT85651.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
rfbE; O-antigen transporter
L2_041_000G1_scaffold_885_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9122..10024
DNA (903bp) protein (301aa)
WbuG n=27 Tax=Escherichia coli RepID=Q5GFM6_ECOLX
WbuG {ECO:0000313|EMBL:AAT85652.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
glycosyltransferase-like protein
L2_041_000G1_scaffold_885_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10021..11208
DNA (1188bp) protein (396aa)
O antigen polymerase n=24 Tax=Escherichia coli RepID=Q46955_ECOLX
O antigen polymerase {ECO:0000313|EMBL:AAC43898.1}; Wzy {ECO:0000313|EMBL:AAT85653.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
wzy1; O antigen polymerase
L2_041_000G1_scaffold_885_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11321..12424
DNA (1104bp) protein (368aa)
WbuH n=27 Tax=Escherichia coli RepID=Q5GFM4_ECOLX
WbuH {ECO:0000313|EMBL:AAT85654.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
wbuH; lipopolysaccharide biosynthesis protein
L2_041_000G1_scaffold_885_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12433..13467
DNA (1035bp) protein (345aa)
Polysaccharide biosynthesis protein n=24 Tax=Escherichia coli RepID=E6ALG5_ECOLX
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase {ECO:0000313|EMBL:ENB12803.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
fnl1; epimerase/dehydratase
L2_041_000G1_scaffold_885_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13469..14575
DNA (1107bp) protein (369aa)
Uncharacterized protein n=24 Tax=Escherichia coli RepID=L3B3R2_ECOLX
Capsular polysaccharide biosynthesis protein Cap5F {ECO:0000313|EMBL:EKJ82918.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
fnlB; NAD-dependent epimerase/dehydratase
L2_041_000G1_scaffold_885_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14572..15702
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Escherichia coli MS 16-3 RepID=E6ALG3_ECOLX
fnl3; UDP-N-acetylglucosamine 2-epimerase
Predicted UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:BAI26166.1}; TaxID=573235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 (strain 11368 / EHEC).;"
L2_041_000G1_scaffold_885_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15702..16910
DNA (1209bp) protein (403aa)
WbuB n=25 Tax=Escherichia coli RepID=Q5GFM0_ECOLX
WbuB {ECO:0000313|EMBL:AAT85658.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
wbuB; glycosyl transferase family protein
L2_041_000G1_scaffold_885_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16901..17308
DNA (408bp) protein (136aa)
WbuC n=46 Tax=Escherichia RepID=Q5GFL9_ECOLX
wbuC; WbuC protein
WbuC {ECO:0000313|EMBL:AAT85659.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_041_000G1_scaffold_885_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17420..18826
DNA (1407bp) protein (469aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
6-phosphogluconate dehydrogenase, decarboxylating n=26 Tax=Escherichia coli RepID=E6ALG0_ECOLX
gnd; 6-phosphogluconate dehydrogenase
L2_041_000G1_scaffold_885_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19073..20239
DNA (1167bp) protein (389aa)
ugd; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=78 Tax=Escherichia coli RepID=B1LP13_ECOSM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ESD11169.1}; TaxID=1268982 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907672.;"
L2_041_000G1_scaffold_885_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20385..21362
DNA (978bp) protein (326aa)
Chain length determinant protein n=54 Tax=Escherichia coli RepID=WZZB3_ECOLX
O-antigen chain length determinant protein
Chain length determinant protein {ECO:0000313|EMBL:EMX49187.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
L2_041_000G1_scaffold_885_21
unknown

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comp(21237..21494)
DNA (258bp) protein (86aa)
Uncharacterized protein n=16 Tax=Escherichia coli RepID=L3BMB1_ECOLX
L2_041_000G1_scaffold_885_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21547..22158)
DNA (612bp) protein (204aa)
hisI; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=12 Tax=Escherichia coli RepID=L3BPH9_ECOLX
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_041_000G1_scaffold_885_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22152..22928)
DNA (777bp) protein (259aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
Imidazole glycerol phosphate synthase subunit HisF n=484 Tax=Enterobacteriaceae RepID=HIS6_ECO27
imidazole glycerol phosphate synthase subunit
L2_041_000G1_scaffold_885_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22910..23647)
DNA (738bp) protein (246aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=110 Tax=Enterobacteriaceae RepID=HIS4_SHIDS
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
L2_041_000G1_scaffold_885_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23647..24237)
DNA (591bp) protein (197aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
Imidazole glycerol phosphate synthase subunit HisH n=12 Tax=Escherichia coli RepID=L3BN62_ECOLX
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
L2_041_000G1_scaffold_885_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24237..25304)
DNA (1068bp) protein (356aa)
hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19)
Histidine biosynthesis bifunctional protein HisB n=12 Tax=Escherichia coli RepID=L3BMA3_ECOLX
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|HAMAP-Rule:MF_01022, ECO:0000256|SAAS:SAAS00021560}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L2_041_000G1_scaffold_885_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25384..26040)
DNA (657bp) protein (219aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
Histidinol-phosphate aminotransferase n=13 Tax=Escherichia coli RepID=E1PFQ5_ECOAB
L2_041_000G1_scaffold_885_28
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26037..27341)
DNA (1305bp) protein (435aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=12 Tax=Escherichia coli RepID=L3BMC5_ECOLX
L2_041_000G1_scaffold_885_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27347..28246)
DNA (900bp) protein (300aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
ATP phosphoribosyltransferase n=851 Tax=Enterobacteriaceae RepID=HIS1_ECO24
L2_041_000G1_scaffold_885_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28725..28976
DNA (252bp) protein (84aa)
Antitoxin YefM n=19 Tax=Escherichia coli RepID=G7RBZ5_ECOC2
yefM; antitoxin of the YoeB-YefM toxin-antitoxin system
YefM protein (Antitoxin to YoeB) {ECO:0000313|EMBL:CDK44871.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
Displaying items 1-30 of 44 in total

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