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L2_041_000G1_scaffold_950

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_950_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..648
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE18_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31044.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
VanW family protein
L2_041_000G1_scaffold_950_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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833..1297
DNA (465bp) protein (155aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Clostridium butyricum RepID=B1R141_CLOBU
spoU rRNA Methylase family protein
L2_041_000G1_scaffold_950_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1317..2153
DNA (837bp) protein (279aa)
DegV protein n=4 Tax=Clostridium butyricum RepID=B1R142_CLOBU
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENZ31042.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DegV family protein
L2_041_000G1_scaffold_950_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2440..3822
DNA (1383bp) protein (461aa)
RNA polymerase sigma-54 factor n=3 Tax=Clostridium butyricum RepID=B1R143_CLOBU
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EEP55541.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
rpoN; putative RNA polymerase sigma-54 factor RpoN
L2_041_000G1_scaffold_950_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4187..5245
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUB0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87509.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DeoR family transcriptional regulator
L2_041_000G1_scaffold_950_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5319..6320
DNA (1002bp) protein (334aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=4 Tax=Clostridium butyricum RepID=B1R145_CLOBU
glyceraldehyde-3-phosphate dehydrogenase, type I
L2_041_000G1_scaffold_950_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6452..7627
DNA (1176bp) protein (392aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Phosphoglycerate kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHL5_CLOBU
pgk; phosphoglycerate kinase
L2_041_000G1_scaffold_950_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8019..8765
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Triosephosphate isomerase n=2 Tax=Clostridium butyricum RepID=M8JG73_CLOBU
tpiA; triosephosphate isomerase
L2_041_000G1_scaffold_950_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9101..10639
DNA (1539bp) protein (513aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=3 Tax=Clostridium butyricum RepID=B1R148_CLOBU
L2_041_000G1_scaffold_950_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10765..11367
DNA (603bp) protein (201aa)
Uncharacterized protein n=5 Tax=Clostridium butyricum RepID=B1R149_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87526.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_000G1_scaffold_950_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11426..11935)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE07_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31034.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative cell wall binding protein
L2_041_000G1_scaffold_950_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12160..13452
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
eno; enolase Eno (EC:4.2.1.11)
Enolase n=4 Tax=Clostridium butyricum RepID=B1R150_CLOBU
L2_041_000G1_scaffold_950_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13832..14185
DNA (354bp) protein (118aa)
Inner membrane protein YhaI n=5 Tax=Clostridium butyricum RepID=B1R151_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87525.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
aminopeptidase
L2_041_000G1_scaffold_950_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14386..14619
DNA (234bp) protein (78aa)
Preprotein translocase, SecG subunit n=4 Tax=Clostridium butyricum RepID=B1R152_CLOBU
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ENZ31031.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
secG; preprotein translocase, SecG subunit SecG
L2_041_000G1_scaffold_950_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14940..16964
DNA (2025bp) protein (675aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUA0_CLOBU
L2_041_000G1_scaffold_950_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17500..18789
DNA (1290bp) protein (430aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.47)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE01_CLOBU
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ENZ31029.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_041_000G1_scaffold_950_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19101..21350
DNA (2250bp) protein (750aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rnr; ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3D8_CLOBU
L2_041_000G1_scaffold_950_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21534..22004
DNA (471bp) protein (157aa)
SsrA-binding protein n=3 Tax=Clostridium butyricum RepID=C4IDY3_CLOBU
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
smpB; SsrA-binding protein SmpB
L2_041_000G1_scaffold_950_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22347..23387
DNA (1041bp) protein (347aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
metN; methionine import ATP-binding protein MetN (EC:3.6.3.-)
Methionine import ATP-binding protein MetN n=3 Tax=Clostridium butyricum RepID=C4IDY2_CLOBU
L2_041_000G1_scaffold_950_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23387..23989
DNA (603bp) protein (201aa)
D-methionine transport system permease protein MetI n=3 Tax=Clostridium butyricum RepID=B1QXI1_CLOBU
D-methionine transport system permease protein MetI {ECO:0000313|EMBL:ETI89205.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
metI; D-methionine transport system permease protein MetI
L2_041_000G1_scaffold_950_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23950..24789
DNA (840bp) protein (280aa)
Lipoprotein n=2 Tax=Clostridium butyricum RepID=B1QXI0_CLOBU
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
YaeC family lipoprotein
L2_041_000G1_scaffold_950_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24997..25962
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QXH9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55121.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_041_000G1_scaffold_950_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26002..26964
DNA (963bp) protein (321aa)
Ribonuclease HI n=2 Tax=Clostridium butyricum RepID=B1QXH8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55199.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_041_000G1_scaffold_950_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27055..27228
DNA (174bp) protein (58aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXH7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31021.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_000G1_scaffold_950_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27478..28785
DNA (1308bp) protein (436aa)
Helix-turn-helix domain protein n=3 Tax=Clostridium butyricum RepID=B1QXH6_CLOBU
Xre family DNA-binding domain and TPR-repeat-containing protein {ECO:0000313|EMBL:KJZ87471.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative transcriptional regulator
L2_041_000G1_scaffold_950_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28802..29803
DNA (1002bp) protein (334aa)
TPR protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KB05_CLOBU
TPR protein {ECO:0000313|EMBL:EEP55435.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_041_000G1_scaffold_950_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29870..31381)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3D0_CLOBU
Band 7 protein:Flotillin {ECO:0000313|EMBL:KJZ87530.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
flotillin
L2_041_000G1_scaffold_950_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31696..34311
DNA (2616bp) protein (872aa)
UPI0003D69A8A related cluster n=1 Tax=unknown RepID=UPI0003D69A8A
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
clpB2; chaperone protein ClpB
Displaying 28 items

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