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L2_041_000G1_scaffold_960

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_960_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..768)
DNA (768bp) protein (256aa)
Type VI secretion system Vgr family protein n=8 Tax=Escherichia coli RepID=L2X115_ECOLX
Vgr-like protein
SntS {ECO:0000313|EMBL:AHW84621.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_041_000G1_scaffold_960_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(784..903)
DNA (120bp) protein (40aa)
Uncharacterized protein n=168 Tax=Escherichia RepID=T2MMQ4_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ46629.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_041_000G1_scaffold_960_3
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(989..1507)
DNA (519bp) protein (173aa)
Aec16 n=288 Tax=Escherichia RepID=Q6TKV2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC75725.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_041_000G1_scaffold_960_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2209..2712
DNA (504bp) protein (168aa)
Aec17 n=174 Tax=Escherichia RepID=Q6TKV1_ECOLX
hypothetical protein
EvfU {ECO:0000313|EMBL:AET37210.1}; TaxID=439184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli RS218.;"
L2_041_000G1_scaffold_960_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2735..4219
DNA (1485bp) protein (495aa)
Aec18 n=182 Tax=Escherichia RepID=Q6TKV0_ECOLX
hypothetical protein
EvpB/family type VI secretion protein {ECO:0000313|EMBL:ELJ76890.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_041_000G1_scaffold_960_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4224..4649
DNA (426bp) protein (142aa)
Type VI secretion system lysozyme-like protein n=29 Tax=Escherichia coli RepID=L3BFL7_ECOLX
Type VI secretion system lysozyme-like protein {ECO:0000313|EMBL:EQP60024.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
type VI secretion system lysozyme-like protein
L2_041_000G1_scaffold_960_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4655..6496
DNA (1842bp) protein (614aa)
Type VI secretion protein n=21 Tax=Escherichia coli RepID=L3BEL7_ECOLX
hypothetical protein
Type VI secretion protein, VC_A0110 family {ECO:0000313|EMBL:ESD33690.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_041_000G1_scaffold_960_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6460..7509
DNA (1050bp) protein (350aa)
Type VI secretion protein n=21 Tax=Escherichia coli RepID=L3BDM9_ECOLX
hypothetical protein
SntK {ECO:0000313|EMBL:AHW84613.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_041_000G1_scaffold_960_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7526..8806
DNA (1281bp) protein (427aa)
Type VI secretion system FHA domain-containing protein n=3 Tax=Escherichia coli RepID=E9Z236_ECOLX
Type VI secretion system FHA domain protein {ECO:0000313|EMBL:EIG84238.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
hypothetical protein
L2_041_000G1_scaffold_960_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8803..9327
DNA (525bp) protein (175aa)
Type VI secretion lipoprotein n=22 Tax=Escherichia coli RepID=L3BDQ4_ECOLX
lipoprotein
Type VI secretion lipoprotein, VC_A0113 family {ECO:0000313|EMBL:ESD33693.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_041_000G1_scaffold_960_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9330..10676
DNA (1347bp) protein (449aa)
Aec25 n=96 Tax=Escherichia coli RepID=Q6TKU3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ54906.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_041_000G1_scaffold_960_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10681..11445
DNA (765bp) protein (255aa)
Uncharacterized protein n=95 Tax=Escherichia RepID=E4P4Z6_ECO8N
hypothetical protein
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:ESD33695.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_041_000G1_scaffold_960_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11455..14217
DNA (2763bp) protein (921aa)
ClpV1 family type VI secretion ATPase n=19 Tax=Escherichia coli RepID=L3BDL2_ECOLX
ClpV1 family type VI secretion ATPase {ECO:0000313|EMBL:ELJ76882.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity
L2_041_000G1_scaffold_960_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14214..14957
DNA (744bp) protein (248aa)
Type VI secretion-associated protein n=21 Tax=Escherichia coli RepID=L3BFS7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE05744.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_041_000G1_scaffold_960_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14962..16404
DNA (1443bp) protein (481aa)
Type VI secretion-associated protein, VC_A0119 family n=46 Tax=Escherichia coli RepID=E9U840_ECOLX
Type VI secretion-associated protein, VC_A0119 family {ECO:0000313|EMBL:ESD33698.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
hypothetical protein
L2_041_000G1_scaffold_960_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16424..19951
DNA (3528bp) protein (1176aa)
IcmF-related protein n=36 Tax=Escherichia coli RepID=E0QX64_ECOLX
IcmF-like protein
Type VI secretion protein IcmF {ECO:0000313|EMBL:EQP60014.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_041_000G1_scaffold_960_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19962..21320
DNA (1359bp) protein (453aa)
Uncharacterized protein n=79 Tax=Escherichia coli RepID=E4P4Z1_ECO8N
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD46465.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_041_000G1_scaffold_960_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21338..21817
DNA (480bp) protein (160aa)
Aec32 n=159 Tax=Escherichia RepID=Q6TKT6_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR06438.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L2_041_000G1_scaffold_960_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22157..22942)
DNA (786bp) protein (262aa)
Uncharacterized protein n=41 Tax=Escherichia RepID=E9U836_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESD46463.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
yafT; aminopeptidase
L2_041_000G1_scaffold_960_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23481..23681)
DNA (201bp) protein (67aa)
DNA polymerase III subunit epsilon n=1 Tax=Escherichia coli cloneA_i1 RepID=G5KJ29_ECOLX
dnaQ; DNA polymerase III subunit epsilon
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EOU72791.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L2_041_000G1_scaffold_960_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23678..23962)
DNA (285bp) protein (95aa)
dnaQ; DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EFJ86072.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFJ86072.1};; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
DNA polymerase III n=3 Tax=Escherichia coli RepID=E9Z247_ECOLX
L2_041_000G1_scaffold_960_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24018..24485
DNA (468bp) protein (156aa)
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
Ribonuclease H n=112 Tax=Escherichia coli RepID=RNH_ECO27
L2_041_000G1_scaffold_960_23
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24540..24971)
DNA (432bp) protein (144aa)
Methyltransferase domain-containing protein n=3 Tax=Escherichia RepID=E9XQB4_ECOLX
yafS; S-adenosyl-L-methionine-dependent methyltransferase
Putative S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:CAQ87811.1}; TaxID=585054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73).;"
L2_041_000G1_scaffold_960_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25005..25760
DNA (756bp) protein (252aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1A.;"
Hydroxyacylglutathione hydrolase n=104 Tax=Escherichia coli RepID=GLO2_ECO27
L2_041_000G1_scaffold_960_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25970..27190
DNA (1221bp) protein (407aa)
mltD; membrane-bound lytic murein transglycosylase D (EC:3.2.1.-)
Membrane-bound lytic murein transglycosylase D n=21 Tax=Escherichia coli RepID=L5VE80_ECOLX
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:EQP60006.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_041_000G1_scaffold_960_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27239..28009)
DNA (771bp) protein (257aa)
Predicted S-adenosyl-L-methionine-dependent methyltransferase n=36 Tax=Escherichia coli RepID=B7UJA6_ECO27
yafE; S-adenosyl-L-methionine-dependent methyltransferase
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:EQP60005.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_041_000G1_scaffold_960_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28087..28911)
DNA (825bp) protein (275aa)
UPF0294 protein YafD n=861 Tax=Enterobacteriaceae RepID=A1A7Q0_ECOK1
hypothetical protein
UPF0294 protein YafD {ECO:0000256|HAMAP-Rule:MF_01119}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_041_000G1_scaffold_960_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29128..29943
DNA (816bp) protein (272aa)
Transcriptional regulator n=1 Tax=Escherichia coli UMEA 3342-1 RepID=V2SSP0_ECOLX
yafC; putative transcriptional regulator LYSR-type
Transcriptional regulator {ECO:0000313|EMBL:EQP60003.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_041_000G1_scaffold_960_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29893..30651)
DNA (759bp) protein (253aa)
dkgB; 2,5-diketo-D-gluconate reductase B (EC:1.1.1.274)
2,5-diketo-D-gluconate reductase B {ECO:0000313|EMBL:CAR06428.1}; EC=1.1.1.274 {ECO:0000313|EMBL:CAR06428.1};; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
2,5-diketo-D-gluconic acid reductase B n=323 Tax=Escherichia RepID=E2QFC9_ECOLX
Displaying 29 items

View Taxonomy