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L2_041_000G1_scaffold_2012

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_2012_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

213..863
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Ribulose-phosphate 3-epimerase n=2 Tax=Parabacteroides merdae RepID=A7AFS0_9PORP
ribulose-phosphate 3-epimerase
L2_041_000G1_scaffold_2012_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1014..2294
DNA (1281bp) protein (427aa)
ComEC/Rec2-like protein n=2 Tax=Parabacteroides merdae RepID=A7AFR9_9PORP
ComEC/Rec2-like protein {ECO:0000313|EMBL:EDN86895.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
competence protein
L2_041_000G1_scaffold_2012_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2309..3382
DNA (1074bp) protein (358aa)
DHHA1 domain protein n=4 Tax=Parabacteroides RepID=A7AFR8_9PORP
DHHA1 domain protein {ECO:0000313|EMBL:EDN86894.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
exopolyphosphatase-like protein
L2_041_000G1_scaffold_2012_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3437..4018
DNA (582bp) protein (194aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AFR7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86893.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2012_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4029..5417
DNA (1389bp) protein (463aa)
Phosphoglucosamine mutase n=2 Tax=Parabacteroides merdae RepID=A7AFR6_9PORP
Phosphoglucosamine mutase {ECO:0000313|EMBL:EDN86892.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
phosphoglucomutase
L2_041_000G1_scaffold_2012_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5713..6174
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WXN3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14060.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_041_000G1_scaffold_2012_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6222..6944
DNA (723bp) protein (241aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AFR4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86890.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2012_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6922..7899
DNA (978bp) protein (326aa)
Transglycosylase SLT domain protein n=2 Tax=Parabacteroides merdae RepID=A7AFR3_9PORP
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EDN86889.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L2_041_000G1_scaffold_2012_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7912..10764
DNA (2853bp) protein (951aa)
Excinuclease ABC, A subunit n=2 Tax=Parabacteroides merdae RepID=A7AFR2_9PORP
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
excinuclease ABC subunit A
L2_041_000G1_scaffold_2012_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10761..10979
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFR1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14064.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_041_000G1_scaffold_2012_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10983..11591
DNA (609bp) protein (203aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6A8Y4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14593.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_041_000G1_scaffold_2012_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11672..12889
DNA (1218bp) protein (406aa)
Transporter, CPA2 family n=2 Tax=Parabacteroides merdae RepID=A7AFQ9_9PORP
Transporter, CPA2 family {ECO:0000313|EMBL:EDN86885.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Na+/H+ exchange protein
L2_041_000G1_scaffold_2012_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12939..14114
DNA (1176bp) protein (392aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Parabacteroides merdae RepID=A7AFQ8_9PORP
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Na+/H+ antiporter
L2_041_000G1_scaffold_2012_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14101..14988
DNA (888bp) protein (296aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=A7AFQ7_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN86883.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2012_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15262..20793
DNA (5532bp) protein (1844aa)
Alpha-2-macroglobulin family protein n=2 Tax=Parabacteroides merdae RepID=A7AFQ6_9PORP
Alpha-2-macroglobulin family protein {ECO:0000313|EMBL:EDN86882.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane protein
L2_041_000G1_scaffold_2012_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20911..21384)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6A8Y9_9PORP
Putative GAF domain-containing protein A {ECO:0000313|EMBL:EDN86881.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
GAF domain-containing protein
L2_041_000G1_scaffold_2012_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21848..21988)
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AXC7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32674.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L2_041_000G1_scaffold_2012_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22167..24428)
DNA (2262bp) protein (754aa)
Helicase associated domain protein n=4 Tax=Parabacteroides RepID=A7AJ37_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32673.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
helicase
L2_041_000G1_scaffold_2012_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24454..24762)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AJ38_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85405.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2012_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24925..25071)
DNA (147bp) protein (49aa)
Uncharacterized protein {ECO:0000313|EMBL:EXY87793.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_041_000G1_scaffold_2012_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25068..25199)
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6A7J2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EXY87801.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_041_000G1_scaffold_2012_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25325..26317)
DNA (993bp) protein (331aa)
UDP-N-acetylglucosamine 2-epimerase n=2 Tax=Parabacteroides merdae RepID=A7AJ40_9PORP
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EDN85407.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
UDP-GlcNAc 2-epimerase
L2_041_000G1_scaffold_2012_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26335..27525)
DNA (1191bp) protein (397aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AJ41_9PORP
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDN85408.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycosyl transferase family protein
L2_041_000G1_scaffold_2012_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27529..29082)
DNA (1554bp) protein (518aa)
Heparinase II/III-like protein n=4 Tax=Parabacteroides RepID=A7AJ42_9PORP
Heparinase II/III-like protein {ECO:0000313|EMBL:EDN85409.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
prenyltransferase and squalene oxidase
L2_041_000G1_scaffold_2012_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29088..30143)
DNA (1056bp) protein (352aa)
Glycosyltransferase, group 1 family protein n=4 Tax=Parabacteroides RepID=A7AJ43_9PORP
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDN85410.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2012_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30140..31243)
DNA (1104bp) protein (368aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AJ44_9PORP
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDN85411.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
group 1 glycosyl transferase
L2_041_000G1_scaffold_2012_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31303..32442)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AJ45_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85412.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_041_000G1_scaffold_2012_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32576..33508)
DNA (933bp) protein (311aa)
Acyltransferase n=2 Tax=Parabacteroides RepID=E1YTW5_9PORP
Acyltransferase {ECO:0000313|EMBL:EDN85413.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_041_000G1_scaffold_2012_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33487..34476)
DNA (990bp) protein (330aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Parabacteroides merdae RepID=A7AJ47_9PORP
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDN85414.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Glycosyltransferase
L2_041_000G1_scaffold_2012_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35144..35284)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BGI4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85417.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Displaying items 1-30 of 43 in total

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