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L2_041_000G1_scaffold_2129

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_2129_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..207
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7ABH3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87606.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2129_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

239..979
DNA (741bp) protein (247aa)
Nitroreductase family protein n=2 Tax=Parabacteroides merdae RepID=A7ABH4_9PORP
Nitroreductase family protein {ECO:0000313|EMBL:EDN87607.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
oxidoreductase
L2_041_000G1_scaffold_2129_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1060..1923)
DNA (864bp) protein (288aa)
Phosphorylase family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XC98_9PORP
Phosphorylase family {ECO:0000313|EMBL:CDD13976.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphorylase
L2_041_000G1_scaffold_2129_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2016..3008)
DNA (993bp) protein (331aa)
UPF0365 protein PARMER_00734 n=3 Tax=Parabacteroides RepID=A7ABH6_9PORP
UPF0365 protein BN675_02375 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_041_000G1_scaffold_2129_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3156..3395)
DNA (240bp) protein (80aa)
Nodulation efficiency protein D n=3 Tax=Parabacteroides RepID=A7ABH7_9PORP
Nodulation efficiency protein D {ECO:0000313|EMBL:CDD13978.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_041_000G1_scaffold_2129_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3407..4846)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6B165_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDN87611.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2129_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4997..5752
DNA (756bp) protein (252aa)
PP-loop family protein n=3 Tax=Parabacteroides RepID=A7ABH9_9PORP
PP-loop family protein {ECO:0000313|EMBL:CDD13980.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_041_000G1_scaffold_2129_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5761..6132
DNA (372bp) protein (124aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A7ABI0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87613.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2129_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6212..7120)
DNA (909bp) protein (303aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=3 Tax=Parabacteroides RepID=A7ABI1_9PORP
L2_041_000G1_scaffold_2129_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7124..7684)
DNA (561bp) protein (187aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7ABI2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13983.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_041_000G1_scaffold_2129_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7816..8601)
DNA (786bp) protein (262aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase n=4 Tax=Parabacteroides RepID=A7ABI4_9PORP
L2_041_000G1_scaffold_2129_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8698..10083)
DNA (1386bp) protein (462aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=3 Tax=Parabacteroides RepID=A7ABI5_9PORP
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase
L2_041_000G1_scaffold_2129_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10123..11178)
DNA (1056bp) protein (352aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
UDP-3-O-acylglucosamine N-acyltransferase n=2 Tax=Parabacteroides merdae RepID=A7ABI6_9PORP
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
L2_041_000G1_scaffold_2129_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11268..12110)
DNA (843bp) protein (281aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Orotidine 5'-phosphate decarboxylase n=2 Tax=Parabacteroides merdae RepID=A7ABI7_9PORP
orotidine 5'-phosphate decarboxylase
L2_041_000G1_scaffold_2129_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12146..13255)
DNA (1110bp) protein (370aa)
Peptide chain release factor 1 n=2 Tax=Parabacteroides merdae RepID=K6ANH1_9PORP
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Peptide chain release factor 1
L2_041_000G1_scaffold_2129_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13248..14420)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7ABI9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13989.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphoribosylformylglycinamidine cyclo-ligase
L2_041_000G1_scaffold_2129_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14465..14938)
DNA (474bp) protein (158aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=2 Tax=Parabacteroides merdae RepID=A7ABJ0_9PORP
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EDN87623.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L2_041_000G1_scaffold_2129_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15729..16310
DNA (582bp) protein (194aa)
Cytidine deaminase n=3 Tax=Parabacteroides RepID=K5ZRI1_9PORP
Cytidine deaminase {ECO:0000313|EMBL:CDD13991.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cytidine deaminase
L2_041_000G1_scaffold_2129_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16380..18104)
DNA (1725bp) protein (575aa)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=2 Tax=Parabacteroides RepID=A7ABJ3_9PORP
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EDN87626.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
phosphoglucomutase phosphomannomutase
L2_041_000G1_scaffold_2129_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18225..19895)
DNA (1671bp) protein (557aa)
Peptidase, M23 family n=2 Tax=Parabacteroides merdae RepID=A7ABJ4_9PORP
Peptidase, M23 family {ECO:0000313|EMBL:EDN87627.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2129_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19899..20876)
DNA (978bp) protein (326aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Parabacteroides merdae RepID=A7ABJ5_9PORP
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EDN87628.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2129_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20883..22235)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7ABJ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87629.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2129_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22394..22798)
DNA (405bp) protein (135aa)
Xaa-His dipeptidase n=3 Tax=Parabacteroides RepID=A7ABJ7_9PORP
Xaa-His dipeptidase {ECO:0000313|EMBL:CDD12712.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
aminoacyl-histidine dipeptidase
L2_041_000G1_scaffold_2129_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22788..23720)
DNA (933bp) protein (311aa)
Xaa-His dipeptidase n=3 Tax=Parabacteroides RepID=A7ABJ7_9PORP
Xaa-His dipeptidase {ECO:0000313|EMBL:EDN87630.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
aminoacyl-histidine dipeptidase
L2_041_000G1_scaffold_2129_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24115..24717
DNA (603bp) protein (201aa)
Outer membrane protein n=4 Tax=Parabacteroides RepID=A7ABJ9_9PORP
Outer membrane protein {ECO:0000313|EMBL:EDN87632.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_2129_26
unknown

Not on your lists

comp(24833..25039)
DNA (207bp) protein (69aa)

This feature has no annotations

L2_041_000G1_scaffold_2129_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25193..25933)
DNA (741bp) protein (247aa)
PepSY domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYW4_9PORP
PepSY domain protein {ECO:0000313|EMBL:CDD14485.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
iron uptake factor
L2_041_000G1_scaffold_2129_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25930..27333)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5U0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14484.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_041_000G1_scaffold_2129_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27377..28990)
DNA (1614bp) protein (538aa)
TonB-dependent receptor plug domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WT00_9PORP
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:CDD14483.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ligand-gated channel protein
L2_041_000G1_scaffold_2129_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29077..29604)
DNA (528bp) protein (176aa)
TonB-dependent receptor plug domain protein n=2 Tax=Parabacteroides merdae RepID=A7ABK3_9PORP
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EDN87636.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-linked outer membrane receptor
Displaying items 1-30 of 46 in total

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