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L2_041_000G1_scaffold_1185

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1185_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..143)
DNA (141bp) protein (47aa)
Cell division protein FtsX n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEU4_CLOBU
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ftsX; cell division protein FtsX
L2_041_000G1_scaffold_1185_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(133..819)
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=3 Tax=Clostridium butyricum RepID=B1QWL0_CLOBU
NLP/P60 family protein {ECO:0000313|EMBL:KJZ94699.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ftsE; cell division ATP-binding protein FtsE
L2_041_000G1_scaffold_1185_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(956..1627)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AD07_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85753.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
yvjA; UPF0750 membrane protein YvjA
L2_041_000G1_scaffold_1185_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1992..2936)
DNA (945bp) protein (315aa)
Transketolase, C-terminal section {ECO:0000313|EMBL:KJZ85748.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KJZ85748.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Transketolase, pyridine binding subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHX4_CLOBU
transketolase
L2_041_000G1_scaffold_1185_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2936..3757)
DNA (822bp) protein (274aa)
DNA polymerase I {ECO:0000313|EMBL:KJZ94703.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KJZ94703.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative transketolase N-terminal section (EC:2.2.1.1)
Transketolase n=4 Tax=Clostridium butyricum RepID=B1QWL3_CLOBU
L2_041_000G1_scaffold_1185_6

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comp(3839..4297)
DNA (459bp) protein (153aa)
mRNA interferase n=4 Tax=Clostridium butyricum RepID=B1QWL4_CLOBU
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:ETJ16610.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
transcriptional modulator of MazE/toxin, MazF
L2_041_000G1_scaffold_1185_7

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comp(4304..4555)
DNA (252bp) protein (84aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QWL5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16611.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_041_000G1_scaffold_1185_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4845..5474)
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=M8K9N3_CLOBU
DNA primase, phage associated {ECO:0000313|EMBL:KJZ94702.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_041_000G1_scaffold_1185_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5537..7045)
DNA (1509bp) protein (503aa)
nnr: bifunctional NAD(P)H-hydrate repair enzyme Nnr (EC:4.2.1.136 5.1.99.6)
Carbohydrate kinase family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHX2_CLOBU
Carbohydrate kinase family protein {ECO:0000313|EMBL:EEP55883.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_041_000G1_scaffold_1185_10

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comp(7039..7416)
DNA (378bp) protein (126aa)
acpS; holo-[acyl-carrier-protein] synthase AcpS (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=4 Tax=Clostridium butyricum RepID=B1QWL8_CLOBU
Holo-[acyl-carrier-protein] synthase {ECO:0000313|EMBL:ETJ16614.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_041_000G1_scaffold_1185_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7486..7815)
DNA (330bp) protein (110aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QWL9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85697.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_000G1_scaffold_1185_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8351..8704)
DNA (354bp) protein (118aa)
Single-stranded DNA-binding protein n=4 Tax=Clostridium butyricum RepID=B1QWM0_CLOBU
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ssb2; single-stranded DNA-binding protein 1
L2_041_000G1_scaffold_1185_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8900..9757)
DNA (858bp) protein (286aa)
YihY family protein n=2 Tax=Clostridium butyricum RepID=M8K9M9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94672.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
yfkH; putative ribonuclease-like protein YfkH
L2_041_000G1_scaffold_1185_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9961..11178)
DNA (1218bp) protein (406aa)
D-alanyl-lipoteichoic acid biosynthesis protein DltB n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTA9_CLOBU
D-alanyl-lipoteichoic acid biosynthesis protein DltB {ECO:0000313|EMBL:ENZ30655.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
protein DltB
L2_041_000G1_scaffold_1185_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11326..12513)
DNA (1188bp) protein (396aa)
DltD, C-domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDY7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94666.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD
L2_041_000G1_scaffold_1185_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12720..14036)
DNA (1317bp) protein (439aa)
UDP-glucose dehydrogenase {ECO:0000313|EMBL:KJZ85718.1}; EC=1.1.1.22 {ECO:0000313|EMBL:KJZ85718.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
UDP-glucose 6-dehydrogenase n=2 Tax=Clostridium butyricum RepID=M8JPI2_CLOBU
UDP-glucose 6-dehydrogenase
L2_041_000G1_scaffold_1185_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14111..14686)
DNA (576bp) protein (192aa)
Hexapeptide transferase family protein n=4 Tax=Clostridium butyricum RepID=B1QWM6_CLOBU
Hexapeptide transferase family protein {ECO:0000313|EMBL:EEP55902.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hexapeptide transferase family protein
L2_041_000G1_scaffold_1185_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14752..15930)
DNA (1179bp) protein (393aa)
Putative pleiotropic regulatory protein DegT n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9M4_CLOBU
Erythromycin biosynthesis sensory transduction protein eryC1 {ECO:0000313|EMBL:KJZ94551.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
erythromycin biosynthesis sensory transduction protein eryC1
L2_041_000G1_scaffold_1185_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16066..18354)
DNA (2289bp) protein (763aa)
Rad3-like DNA helicase (EC:3.6.4.12)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTB5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30660.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_041_000G1_scaffold_1185_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18479..19069)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JDY2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30661.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF1836
L2_041_000G1_scaffold_1185_21

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19964..20206
DNA (243bp) protein (81aa)
Conserved domain protein n=3 Tax=Clostridium butyricum RepID=C4ICV4_CLOBU
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ETJ16625.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
AbrB family transcriptional regulator
L2_041_000G1_scaffold_1185_22
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20303..20959)
DNA (657bp) protein (219aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
rsmI; ribosomal RNA small subunit methyltransferase I (EC:2.1.1.198)
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JN55_CLOBU
Displaying 22 items

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