name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L2_041_000G1_scaffold_1186_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2..778)
|
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA polymerase IV n=3 Tax=Parabacteroides RepID=A7AL65_9PORP
DNA damage-inducible protein
|
|
L2_041_000G1_scaffold_1186_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(778..2361)
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C4-dicarboxylate anaerobic carrier n=3 Tax=Parabacteroides RepID=A7AL64_9PORP
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:CDD14196.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
C4-dicarboxylate anaerobic carrier
|
|
L2_041_000G1_scaffold_1186_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2358..3632)
|
RmuC domain protein n=2 Tax=Parabacteroides merdae RepID=A7AL63_9PORP
RmuC domain protein {ECO:0000313|EMBL:EDN84735.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
|
|
L2_041_000G1_scaffold_1186_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
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Not on your lists |
3793..4296
|
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Probable thiol peroxidase n=7 Tax=Parabacteroides RepID=A7AL62_9PORP
thiol peroxidase
|
|
L2_041_000G1_scaffold_1186_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(4566..5258)
|
Transcriptional regulatory protein RprY n=3 Tax=Parabacteroides RepID=A7AL60_9PORP
Transcriptional regulatory protein RprY {ECO:0000313|EMBL:CDD14199.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
|
|
L2_041_000G1_scaffold_1186_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(5417..6598)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Parabacteroides RepID=A7AL59_9PORP
integral membrane sensor signal transduction histidine kinase
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|
L2_041_000G1_scaffold_1186_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
6751..8895
|
TonB-dependent receptor n=2 Tax=Parabacteroides merdae RepID=A7AL58_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EDN84730.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
|
|
L2_041_000G1_scaffold_1186_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
9196..9582
|
DNA-binding protein HU n=3 Tax=Parabacteroides RepID=A7AL57_9PORP
DNA-binding protein HU {ECO:0000313|EMBL:EDN84729.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
non-specific DNA-binding protein HU-1
|
|
L2_041_000G1_scaffold_1186_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
9729..11816
|
VirE N-terminal domain protein n=2 Tax=Parabacteroides merdae RepID=A7AL55_9PORP
VirE N-terminal domain protein {ECO:0000313|EMBL:EDN84728.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative helicase
|
|
L2_041_000G1_scaffold_1186_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
11944..12951
|
CRISPR-associated endonuclease Cas3-HD n=2 Tax=Parabacteroides merdae RepID=A7AL54_9PORP
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:EDN84726.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD
|
|
L2_041_000G1_scaffold_1186_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
12948..14168
|
CRISPR-associated endonuclease Cas3-HD n=2 Tax=Parabacteroides merdae RepID=A7AL54_9PORP
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:EDN84726.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD
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|
L2_041_000G1_scaffold_1186_12
unknown
|
Not on your lists |
comp(15165..15260)
|
This feature has no annotations |
|
L2_041_000G1_scaffold_1186_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
17747..18433
|
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AL48_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84720.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
|
|
L2_041_000G1_scaffold_1186_14
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(18305..18595)
|
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6AX95_9PORP
CRISPR-associated protein Cas2
|
|
L2_041_000G1_scaffold_1186_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(18600..19634)
|
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
CRISPR-associated endonuclease Cas1 n=2 Tax=Parabacteroides merdae RepID=A7AL47_9PORP
CRISPR-associated protein, Cas1 family
|
|
L2_041_000G1_scaffold_1186_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(19638..20306)
|
CRISPR-associated protein Cas4 n=2 Tax=Parabacteroides merdae RepID=A7AL46_9PORP
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:EDN84718.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
CRISPR-associated protein Cas4
|
|
L2_041_000G1_scaffold_1186_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(20303..21169)
|
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AL45_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84717.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
protein Csd2 family protein
|
|
L2_041_000G1_scaffold_1186_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(21182..22936)
|
CRISPR-associated protein, Csd1 family n=2 Tax=Parabacteroides merdae RepID=A7AL44_9PORP
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:EDN84716.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG
|
|
L2_041_000G1_scaffold_1186_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(22933..23613)
|
CRISPR-associated protein Cas5, Dvulg subtype n=2 Tax=Parabacteroides merdae RepID=A7AL43_9PORP
CRISPR-associated protein Cas5, Dvulg subtype {ECO:0000313|EMBL:EDN84715.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
CRISPR-associated protein Cas5, subtype I-C/DVULG
|
|
L2_041_000G1_scaffold_1186_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(23874..24050)
|
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AL41_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84713.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
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L2_041_000G1_scaffold_1186_21
unknown
|
Not on your lists |
comp(25643..25771)
|
This feature has no annotations |
|
L2_041_000G1_scaffold_1186_22
unknown
|
Not on your lists |
27044..27229
|
This feature has no annotations |
|
L2_041_000G1_scaffold_1186_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
27480..28775
|
MATE efflux family protein n=2 Tax=Parabacteroides merdae RepID=A7AL36_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EDN84708.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA-damage-inducible protein F
|
|
L2_041_000G1_scaffold_1186_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
28938..29114
|
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K5ZMN7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14205.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
|
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L2_041_000G1_scaffold_1186_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(29281..30864)
|
Acyl-CoA dehydrogenase C-terminal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XCZ3_9PORP
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EDN84705.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acyl-CoA dehydrogenase
|
|
L2_041_000G1_scaffold_1186_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(30869..31888)
|
Electron transfer flavoprotein FAD-binding domain protein n=3 Tax=Parabacteroides RepID=A7AL32_9PORP
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EDN84704.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
electron transfer flavoprotein subunit alpha
|
|
L2_041_000G1_scaffold_1186_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(31937..32842)
|
Electron transfer flavoprotein domain protein n=2 Tax=Parabacteroides merdae RepID=A7AL31_9PORP
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:EDN84703.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
electron transfer flavoprotein subunit beta
|
|
L2_041_000G1_scaffold_1186_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(33169..36021)
|
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase n=3 Tax=Parabacteroides RepID=A7AL29_9PORP
|
|
L2_041_000G1_scaffold_1186_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(36065..36703)
|
Metallo-beta-lactamase domain protein n=2 Tax=Parabacteroides merdae RepID=A7AL28_9PORP
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDN84700.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
metallo-beta-lactamase
|
|
L2_041_000G1_scaffold_1186_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(36700..37371)
|
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AL27_9PORP
gidB; 16S rRNA methyltransferase GidB
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