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L2_041_000G1_scaffold_1288

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Displaying items 1-30 of 73 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1288_1
unknown

Not on your lists

comp(256..573)
DNA (318bp) protein (106aa)

This feature has no annotations

L2_041_000G1_scaffold_1288_2
unknown

Not on your lists

comp(582..791)
DNA (210bp) protein (70aa)

This feature has no annotations

L2_041_000G1_scaffold_1288_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(849..2057)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2BEB9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS12667.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
L2_041_000G1_scaffold_1288_4
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2234..3742)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B9Z8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS12666.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
SusD family.
L2_041_000G1_scaffold_1288_5
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3766..6603)
DNA (2838bp) protein (946aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides RepID=N2B471_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS12665.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
Outer membrane receptor proteins, mostly Fe transport
L2_041_000G1_scaffold_1288_6
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7367..8986)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YVK2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB46961.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
L2_041_000G1_scaffold_1288_7
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9036..12485)
DNA (3450bp) protein (1150aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6ARE3_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB57229.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L2_041_000G1_scaffold_1288_8
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12603..13688)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZRC7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57201.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
anti-sigma factor
L2_041_000G1_scaffold_1288_9
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13734..14291)
DNA (558bp) protein (186aa)
Sigma-70 family RNA polymerase sigma factor n=3 Tax=Parabacteroides RepID=K6A3Z5_9PORP
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KKB57200.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
RNA polymerase ECF-type sigma factor
L2_041_000G1_scaffold_1288_10
unknown

Not on your lists

14345..14443
DNA (99bp) protein (33aa)

This feature has no annotations

L2_041_000G1_scaffold_1288_11
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14696..15046
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB46986.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
L2_041_000G1_scaffold_1288_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15060..16259
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AC18_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87801.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_1288_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16232..17857
DNA (1626bp) protein (542aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZPM5_9PORP
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:CDD14168.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
alkaline phosphatase
L2_041_000G1_scaffold_1288_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17960..21319
DNA (3360bp) protein (1120aa)
Protein translocase subunit SecA n=4 Tax=Parabacteroides RepID=A7AC16_9PORP
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
secA; preprotein translocase subunit SecA
L2_041_000G1_scaffold_1288_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21465..22202
DNA (738bp) protein (246aa)
Tetratricopeptide repeat protein n=4 Tax=Parabacteroides RepID=A7AC15_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDN87798.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_1288_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22339..23157)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6ALM9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10300.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_041_000G1_scaffold_1288_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23231..24532)
DNA (1302bp) protein (434aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BL80_9PORP
two-component system sensor histidine kinase
L2_041_000G1_scaffold_1288_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24546..25919)
DNA (1374bp) protein (458aa)
Sigma-54 interaction domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X4V1_9PORP
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDD14164.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system response regulator
L2_041_000G1_scaffold_1288_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25989..27356)
DNA (1368bp) protein (456aa)
Outer membrane efflux protein n=2 Tax=Parabacteroides merdae RepID=A7AC11_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EDN87794.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane protein TolC
L2_041_000G1_scaffold_1288_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27391..27852)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AZ83_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14162.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_041_000G1_scaffold_1288_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27989..28198
DNA (210bp) protein (70aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AC09_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14161.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_041_000G1_scaffold_1288_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28222..28779
DNA (558bp) protein (186aa)
PAP2 family protein n=3 Tax=Parabacteroides RepID=A7AC08_9PORP
PAP2 family protein {ECO:0000313|EMBL:EDN87791.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
phosphoesterase
L2_041_000G1_scaffold_1288_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28876..29658
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AC05_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87790.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_1288_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29846..30511)
DNA (666bp) protein (222aa)
ABC transporter, ATP-binding protein n=4 Tax=Parabacteroides RepID=A7AC04_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN87787.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter ATP-binding protein
L2_041_000G1_scaffold_1288_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30678..31211)
DNA (534bp) protein (178aa)
Efflux ABC transporter, permease protein n=2 Tax=Parabacteroides merdae RepID=A7AC03_9PORP
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN87786.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter permease
L2_041_000G1_scaffold_1288_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31208..31852)
DNA (645bp) protein (215aa)
Efflux ABC transporter, permease protein n=2 Tax=Parabacteroides merdae RepID=A7AC03_9PORP
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN87786.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter permease
L2_041_000G1_scaffold_1288_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31863..33125)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZGC2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10290.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_041_000G1_scaffold_1288_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33199..34158)
DNA (960bp) protein (320aa)
Efflux ABC transporter, permease protein n=3 Tax=Parabacteroides RepID=A7AC01_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD14155.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter permease
L2_041_000G1_scaffold_1288_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34202..34372)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z406_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD14155.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative ABC transporter permease component
L2_041_000G1_scaffold_1288_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34397..35029)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A3R0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10288.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
Displaying items 1-30 of 73 in total

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